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BioC 3.2: CHECK report for oneChannelGUI on zin1

This page was generated on 2015-08-24 10:47:15 -0700 (Mon, 24 Aug 2015).

Package 707/1071HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
oneChannelGUI 1.35.0
Raffaele A Calogero
Snapshot Date: 2015-08-23 16:24:14 -0700 (Sun, 23 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/oneChannelGUI
Last Changed Rev: 102594 / Revision: 107696
Last Changed Date: 2015-04-16 13:02:44 -0700 (Thu, 16 Apr 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK [ ERROR ]
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  ERROR  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  ERROR  OK 

Summary

Package: oneChannelGUI
Version: 1.35.0
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD check --no-vignettes --timings oneChannelGUI_1.35.0.tar.gz
StartedAt: 2015-08-24 02:17:52 -0700 (Mon, 24 Aug 2015)
EndedAt: 2015-08-24 02:17:54 -0700 (Mon, 24 Aug 2015)
EllapsedTime: 1.5 seconds
RetCode: 1
Status:  ERROR 
CheckDir: oneChannelGUI.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD check --no-vignettes --timings oneChannelGUI_1.35.0.tar.gz
###
##############################################################################
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* using log directory ‘/home/biocbuild/bbs-3.2-bioc/meat/oneChannelGUI.Rcheck’
* using R version 3.2.2 (2015-08-14)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘oneChannelGUI/DESCRIPTION’ ... OK
* this is package ‘oneChannelGUI’ version ‘1.35.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘ChIPpeakAnno’

Depends: includes the non-default packages:
  ‘Biobase’ ‘affylmGUI’ ‘tkrplot’ ‘tkWidgets’ ‘IRanges’ ‘Rsamtools’
  ‘Biostrings’ ‘siggenes’ ‘chimera’
Adding so many packages to the search path is excessive and importing
selectively is preferable.

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.2-bioc/meat/oneChannelGUI.Rcheck/00check.log’
for details.