Back to the "Multiple platform build/check report" A  B  C  D  E [F] G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: BUILD report for flowType on oaxaca

This page was generated on 2015-10-27 17:39:37 -0400 (Tue, 27 Oct 2015).

Package 371/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowType 2.8.0
Nima Aghaeepour
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/flowType
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: flowType
Version: 2.8.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowType
StartedAt: 2015-10-26 21:57:46 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 21:58:13 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 26.7 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowType
###
##############################################################################
##############################################################################


* checking for file ‘flowType/DESCRIPTION’ ... OK
* preparing ‘flowType’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: Rcpp
Loading required package: BH
Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning in fun(libname, pkgname) : Error in 'rgl_init'

Error: processing vignette 'flowType.Rnw' failed with diagnostics:
 chunk 13 (label = xtabout) 
Error in `colnames<-`(`*tmp*`, value = c("p-value", "adjusted p-value",  : 
  length of 'dimnames' [2] not equal to array extent
Execution halted