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BioC experimental data: CHECK report for DMRcatedata on windows1.bioconductor.org

This page was generated on 2015-10-24 18:52:54 -0400 (Sat, 24 Oct 2015).

Package 65/257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMRcatedata 1.6.1
Tim Peters
Snapshot Date: 2015-10-24 12:50:03 -0400 (Sat, 24 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_2/experiment/pkgs/DMRcatedata
Last Changed Rev: 3467 / Revision: 3473
Last Changed Date: 2015-10-22 12:42:36 -0400 (Thu, 22 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK YES, new version is higher than in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK [ OK ] OK 

Summary

Package: DMRcatedata
Version: 1.6.1
Command: rm -rf DMRcatedata.buildbin-libdir DMRcatedata.Rcheck && mkdir DMRcatedata.buildbin-libdir DMRcatedata.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DMRcatedata.buildbin-libdir DMRcatedata_1.6.1.tar.gz >DMRcatedata.Rcheck\00install.out 2>&1 && cp DMRcatedata.Rcheck\00install.out DMRcatedata-install.out && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=DMRcatedata.buildbin-libdir --install="check:DMRcatedata-install.out" --force-multiarch --no-vignettes --timings DMRcatedata_1.6.1.tar.gz
StartedAt: 2015-10-24 14:42:37 -0400 (Sat, 24 Oct 2015)
EndedAt: 2015-10-24 14:43:42 -0400 (Sat, 24 Oct 2015)
EllapsedTime: 64.5 seconds
RetCode: 0
Status:  OK  
CheckDir: DMRcatedata.Rcheck
Warnings: 0

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf DMRcatedata.buildbin-libdir DMRcatedata.Rcheck && mkdir DMRcatedata.buildbin-libdir DMRcatedata.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DMRcatedata.buildbin-libdir DMRcatedata_1.6.1.tar.gz >DMRcatedata.Rcheck\00install.out 2>&1 && cp DMRcatedata.Rcheck\00install.out DMRcatedata-install.out  && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=DMRcatedata.buildbin-libdir --install="check:DMRcatedata-install.out" --force-multiarch --no-vignettes --timings DMRcatedata_1.6.1.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'C:/biocbld/bbs-3.2-data-experiment/meat/DMRcatedata.Rcheck'
* using R version 3.2.2 Patched (2015-08-16 r69094)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DMRcatedata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DMRcatedata' version '1.6.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DMRcatedata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 15.4Mb
  sub-directories of 1Mb or more:
    data  15.2Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [8s] OK
Examples with CPU or elapsed time > 5s
                    user system elapsed
DMRcatedata-package 5.99   0.09    6.08
** running examples for arch 'x64' ... [9s] OK
Examples with CPU or elapsed time > 5s
                    user system elapsed
DMRcatedata-package 6.07   0.01    6.08
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'C:/biocbld/bbs-3.2-data-experiment/meat/DMRcatedata.Rcheck/00check.log'
for details.


DMRcatedata.Rcheck/00install.out:


install for i386

* installing *source* package 'DMRcatedata' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DMRcatedata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DMRcatedata' as DMRcatedata_1.6.1.zip
* DONE (DMRcatedata)

DMRcatedata.Rcheck/examples_i386/DMRcatedata-Ex.timings:

nameusersystemelapsed
DMRcatedata-package5.990.096.08

DMRcatedata.Rcheck/examples_x64/DMRcatedata-Ex.timings:

nameusersystemelapsed
DMRcatedata-package6.070.016.08