BioC experimental data: CHECK report for RNAseqData.HNRNPC.bam.chr14 on moscato1

Package: RNAseqData.HNRNPC.bam.chr14

Version: 0.8.0

Command: rm -rf RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14.Rcheck && mkdir RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14_0.8.0.tar.gz >RNAseqData.HNRNPC.bam.chr14.Rcheck\00install.out 2>&1 && cp RNAseqData.HNRNPC.bam.chr14.Rcheck\00install.out RNAseqData.HNRNPC.bam.chr14-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir --install="check:RNAseqData.HNRNPC.bam.chr14-install.out" --force-multiarch --no-vignettes --timings RNAseqData.HNRNPC.bam.chr14_0.8.0.tar.gz

StartedAt: 2016-04-20 15:18:32 -0700 (Wed, 20 Apr 2016)

EndedAt: 2016-04-20 15:27:02 -0700 (Wed, 20 Apr 2016)

EllapsedTime: 509.6 seconds

RetCode: 0

Status:  OK

CheckDir: RNAseqData.HNRNPC.bam.chr14.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14.Rcheck && mkdir RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14_0.8.0.tar.gz >RNAseqData.HNRNPC.bam.chr14.Rcheck\00install.out 2>&1 && cp RNAseqData.HNRNPC.bam.chr14.Rcheck\00install.out RNAseqData.HNRNPC.bam.chr14-install.out  && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir --install="check:RNAseqData.HNRNPC.bam.chr14-install.out" --force-multiarch --no-vignettes --timings RNAseqData.HNRNPC.bam.chr14_0.8.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.2-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck'
* using R version 3.2.4 (2016-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RNAseqData.HNRNPC.bam.chr14/DESCRIPTION' ... OK
* this is package 'RNAseqData.HNRNPC.bam.chr14' version '0.8.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RNAseqData.HNRNPC.bam.chr14' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 420.0Mb
  sub-directories of 1Mb or more:
    extdata  419.9Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... [86s] OK
Examples with CPU or elapsed time > 5s
                                     user system elapsed
RNAseqData.HNRNPC.bam.chr14-package 19.76   0.64   79.87
** running examples for arch 'x64' ... [64s] OK
Examples with CPU or elapsed time > 5s
                                     user system elapsed
RNAseqData.HNRNPC.bam.chr14-package 19.22   0.68   46.64
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'D:/biocbld/bbs-3.2-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'RNAseqData.HNRNPC.bam.chr14' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'RNAseqData.HNRNPC.bam.chr14' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RNAseqData.HNRNPC.bam.chr14' as RNAseqData.HNRNPC.bam.chr14_0.8.0.zip
* DONE (RNAseqData.HNRNPC.bam.chr14)

name	user	system	elapsed
RNAseqData.HNRNPC.bam.chr14-package	19.76	0.64	79.87

name	user	system	elapsed
RNAseqData.HNRNPC.bam.chr14-package	19.22	0.68	46.64