Back to Build/check report for BioC 3.22 experimental data
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2025-10-21 15:41 -0400 (Tue, 21 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.3 LTS)x86_644.5.1 Patched (2025-08-23 r88802) -- "Great Square Root" 4888
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 94/435HostnameOS / ArchINSTALLBUILDCHECK
derfinderData 2.27.0  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2025-10-21 07:30 -0400 (Tue, 21 Oct 2025)
git_url: https://git.bioconductor.org/packages/derfinderData
git_branch: devel
git_last_commit: 76b42f0
git_last_commit_date: 2025-04-15 09:58:58 -0400 (Tue, 15 Apr 2025)
nebbiolo2Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

BUILD results for derfinderData on nebbiolo2

To the developers/maintainers of the derfinderData package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: derfinderData
Version: 2.27.0
Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data derfinderData
StartedAt: 2025-10-21 11:14:06 -0400 (Tue, 21 Oct 2025)
EndedAt: 2025-10-21 11:14:13 -0400 (Tue, 21 Oct 2025)
EllapsedTime: 7.0 seconds
RetCode: 0
Status:   OK  
PackageFile: derfinderData_2.27.0.tar.gz
PackageFileSize: 25.57 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data derfinderData
###
##############################################################################
##############################################################################


* checking for file ‘derfinderData/DESCRIPTION’ ... OK
* preparing ‘derfinderData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘derfinderData/inst/extdata/fullCov/fullCovA1C.RData’
    ‘derfinderData/inst/extdata/fullCov/fullCovAMY.RData’
* building ‘derfinderData_2.27.0.tar.gz’