RamiGO 1.17.0 Markus Schroeder
Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RamiGO | Last Changed Rev: 109592 / Revision: 109948 | Last Changed Date: 2015-10-13 15:59:53 -0400 (Tue, 13 Oct 2015) |
| linux2.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | ERROR | skipped | | |
windows2.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | [ ERROR ] | skipped | skipped | |
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### Running command:
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### chmod a+r RamiGO -R && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RamiGO
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* checking for file 'RamiGO/DESCRIPTION' ... OK
* preparing 'RamiGO':
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .
Creating pdf output from LaTeX ...
Saving output to 'c:/biocbld/bbs-3.3-bioc/tmpdir/RtmpMHAiCE/Rbuildd0c35153131/RamiGO/build/RamiGO.pdf' ...
Done
* creating vignettes ...Warning: running command '"c:/biocbld/bbs-3.3-bioc/R/bin/x64/Rscript" --vanilla --default-packages= -e "tools::buildVignettes(dir = '.', tangle = TRUE)"' had status 1
ERROR
Loading required package: gsubfn
Loading required package: proto
Error: processing vignette 'RamiGO.Rnw' failed with diagnostics:
chunk 5 (label = getAmigoTreeDOT)
Error in `[<-`(`*tmp*`, relations[i, "parent"], relations[i, "child"], :
subscript out of bounds
Execution halted