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BioC 3.4: INSTALL report for HTSanalyzeR on moscato1

This page was generated on 2016-09-21 03:43:07 -0700 (Wed, 21 Sep 2016).

Package 584/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSanalyzeR 2.25.0
Xin Wang
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/HTSanalyzeR
Last Changed Rev: 117081 / Revision: 121152
Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: HTSanalyzeR
Version: 2.25.0
Command: rm -rf HTSanalyzeR.buildbin-libdir && mkdir HTSanalyzeR.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/HTSanalyzeR_2.25.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=HTSanalyzeR.buildbin-libdir --merge-multiarch HTSanalyzeR_2.25.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL HTSanalyzeR_2.25.0.zip && rm HTSanalyzeR_2.25.0.tar.gz HTSanalyzeR_2.25.0.zip
StartedAt: 2016-09-19 21:13:39 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 21:14:27 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 47.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf HTSanalyzeR.buildbin-libdir && mkdir HTSanalyzeR.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/HTSanalyzeR_2.25.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=HTSanalyzeR.buildbin-libdir --merge-multiarch HTSanalyzeR_2.25.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL HTSanalyzeR_2.25.0.zip  && rm HTSanalyzeR_2.25.0.tar.gz HTSanalyzeR_2.25.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 11 2654k   11  306k    0     0   269k      0  0:00:09  0:00:01  0:00:08  270k
 31 2654k   31  829k    0     0   384k      0  0:00:06  0:00:02  0:00:04  384k
 31 2654k   31  829k    0     0   261k      0  0:00:10  0:00:03  0:00:07  261k
 68 2654k   68 1815k    0     0   384k      0  0:00:06  0:00:04  0:00:02  385k
100 2654k  100 2654k    0     0   556k      0  0:00:04  0:00:04 --:--:--  556k

install for i386

* installing *source* package 'HTSanalyzeR' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
Found more than one class "atomicVector" in cache; using the first, from namespace 'Matrix'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'

install for x64

* installing *source* package 'HTSanalyzeR' ...
** testing if installed package can be loaded
Warning: replacing previous import 'igraph::union' by 'GSEABase::union' when loading 'HTSanalyzeR'
* MD5 sums
packaged installation of 'HTSanalyzeR' as HTSanalyzeR_2.25.0.zip
* DONE (HTSanalyzeR)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'HTSanalyzeR' successfully unpacked and MD5 sums checked