mgsa 1.21.0
Sebastian Bauer
| Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mgsa | | Last Changed Rev: 117081 / Revision: 121152 | | Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | [ OK ] | OK | WARNINGS | OK | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf mgsa.buildbin-libdir && mkdir mgsa.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/mgsa_1.21.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=mgsa.buildbin-libdir --merge-multiarch mgsa_1.21.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL mgsa_1.21.0.zip && rm mgsa_1.21.0.tar.gz mgsa_1.21.0.zip
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install for i386
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
C:/Rtools/mingw_32/bin/gcc -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"c:/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for
^
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -Lc:/local323/lib/i386 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'mgsa'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
C:/Rtools/mingw_64/bin/gcc -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG -I"c:/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for
^
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical
^
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -Lc:/local323/lib/x64 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mgsa' as mgsa_1.21.0.zip
* DONE (mgsa)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'mgsa' successfully unpacked and MD5 sums checked