Back to the "Multiple platform build/check report"

BioC experimental data: CHECK report for CellMapperData on moscato1

This page was generated on 2016-09-21 21:57:32 -0700 (Wed, 21 Sep 2016).

Package 38/304HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellMapperData 0.99.5
Brad Nelms
Snapshot Date: 2016-09-21 09:20:16 -0700 (Wed, 21 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/CellMapperData
Last Changed Rev: 3881 / Revision: 3889
Last Changed Date: 2016-09-03 16:12:05 -0700 (Sat, 03 Sep 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK [ OK ] OK 

Summary

Package: CellMapperData
Version: 0.99.5
Command: rm -rf CellMapperData.buildbin-libdir CellMapperData.Rcheck && mkdir CellMapperData.buildbin-libdir CellMapperData.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CellMapperData.buildbin-libdir CellMapperData_0.99.5.tar.gz >CellMapperData.Rcheck\00install.out 2>&1 && cp CellMapperData.Rcheck\00install.out CellMapperData-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=CellMapperData.buildbin-libdir --install="check:CellMapperData-install.out" --force-multiarch --no-vignettes --timings CellMapperData_0.99.5.tar.gz
StartedAt: 2016-09-21 13:12:28 -0700 (Wed, 21 Sep 2016)
EndedAt: 2016-09-21 13:14:44 -0700 (Wed, 21 Sep 2016)
EllapsedTime: 135.6 seconds
RetCode: 0
Status:  OK  
CheckDir: CellMapperData.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf CellMapperData.buildbin-libdir CellMapperData.Rcheck && mkdir CellMapperData.buildbin-libdir CellMapperData.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CellMapperData.buildbin-libdir CellMapperData_0.99.5.tar.gz >CellMapperData.Rcheck\00install.out 2>&1 && cp CellMapperData.Rcheck\00install.out CellMapperData-install.out  && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=CellMapperData.buildbin-libdir --install="check:CellMapperData-install.out" --force-multiarch --no-vignettes --timings CellMapperData_0.99.5.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/CellMapperData.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'CellMapperData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CellMapperData' version '0.99.5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'CellMapperData' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

CellMapperData.Rcheck/00install.out:


install for i386

* installing *source* package 'CellMapperData' ...
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'CellMapperData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellMapperData' as CellMapperData_0.99.5.zip
* DONE (CellMapperData)

CellMapperData.Rcheck/examples_i386/CellMapperData-Ex.timings:

nameusersystemelapsed
CellMapperData-package0.340.140.80

CellMapperData.Rcheck/examples_x64/CellMapperData-Ex.timings:

nameusersystemelapsed
CellMapperData-package0.410.110.79