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BioC experimental data: CHECK report for lydata on moscato1

This page was generated on 2016-09-21 21:57:31 -0700 (Wed, 21 Sep 2016).

Package 171/304HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lydata 0.99.1
Alex Pickering
Snapshot Date: 2016-09-21 09:20:16 -0700 (Wed, 21 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/lydata
Last Changed Rev: 3802 / Revision: 3889
Last Changed Date: 2016-06-16 18:10:59 -0700 (Thu, 16 Jun 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK [ OK ] OK 

Summary

Package: lydata
Version: 0.99.1
Command: rm -rf lydata.buildbin-libdir lydata.Rcheck && mkdir lydata.buildbin-libdir lydata.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=lydata.buildbin-libdir lydata_0.99.1.tar.gz >lydata.Rcheck\00install.out 2>&1 && cp lydata.Rcheck\00install.out lydata-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=lydata.buildbin-libdir --install="check:lydata-install.out" --force-multiarch --no-vignettes --timings lydata_0.99.1.tar.gz
StartedAt: 2016-09-21 14:55:00 -0700 (Wed, 21 Sep 2016)
EndedAt: 2016-09-21 15:03:28 -0700 (Wed, 21 Sep 2016)
EllapsedTime: 508.0 seconds
RetCode: 0
Status:  OK  
CheckDir: lydata.Rcheck
Warnings: 0

Command output

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###
### Running command:
###
###   rm -rf lydata.buildbin-libdir lydata.Rcheck && mkdir lydata.buildbin-libdir lydata.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=lydata.buildbin-libdir lydata_0.99.1.tar.gz >lydata.Rcheck\00install.out 2>&1 && cp lydata.Rcheck\00install.out lydata-install.out  && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=lydata.buildbin-libdir --install="check:lydata-install.out" --force-multiarch --no-vignettes --timings lydata_0.99.1.tar.gz
###
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* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/lydata.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'lydata/DESCRIPTION' ... OK
* this is package 'lydata' version '0.99.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'lydata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 318.5Mb
  sub-directories of 1Mb or more:
    extdata  318.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking examples ... NONE
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  'D:/biocbld/bbs-3.4-data-experiment/meat/lydata.Rcheck/00check.log'
for details.


lydata.Rcheck/00install.out:


install for i386

* installing *source* package 'lydata' ...
** inst
** help
No man pages found in package  'lydata' 
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'lydata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'lydata' as lydata_0.99.1.zip
* DONE (lydata)