msdata 0.12.1
Steffen Neumann , Laurent Gatto
| Snapshot Date: 2016-09-21 09:20:16 -0700 (Wed, 21 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/msdata | | Last Changed Rev: 3829 / Revision: 3889 | | Last Changed Date: 2016-07-27 07:45:21 -0700 (Wed, 27 Jul 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | OK | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | OK | OK | [ OK ] | OK | |
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### Running command:
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### rm -rf msdata.buildbin-libdir msdata.Rcheck && mkdir msdata.buildbin-libdir msdata.Rcheck && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=msdata.buildbin-libdir msdata_0.12.1.tar.gz >msdata.Rcheck\00install.out 2>&1 && cp msdata.Rcheck\00install.out msdata-install.out && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD check --library=msdata.buildbin-libdir --install="check:msdata-install.out" --force-multiarch --no-vignettes --timings msdata_0.12.1.tar.gz
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* using log directory 'D:/biocbld/bbs-3.4-data-experiment/meat/msdata.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'msdata/DESCRIPTION' ... OK
* this is package 'msdata' version '0.12.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'msdata' can be installed ... OK
* checking installed package size ... NOTE
installed size is 52.3Mb
sub-directories of 1Mb or more:
cdf 3.5Mb
fticr 5.8Mb
iontrap 1.7Mb
lockmass 4.1Mb
microtofq 16.8Mb
mzid 3.9Mb
proteomics 16.1Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
proteomics 0.33 0.02 6.96
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'D:/biocbld/bbs-3.4-data-experiment/meat/msdata.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'msdata' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
Warning in fun(libname, pkgname) :
mzR has been built against a different Rcpp version (0.12.6)
than is installed on your system (0.12.7). This might lead to errors
when loading mzR. If you encounter such issues, please send a report,
including the output of sessionInfo() to the Bioc support forum at
https://support.bioconductor.org/. For details see also
https://github.com/sneumann/mzR/wiki/mzR-Rcpp-compiler-linker-issue.
** testing if installed package can be loaded
install for x64
* installing *source* package 'msdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'msdata' as msdata_0.12.1.zip
* DONE (msdata)