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BioC 3.4: INSTALL report for GeneSelectMMD on malbec1

This page was generated on 2017-04-15 16:09:50 -0400 (Sat, 15 Apr 2017).

Package 494/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GeneSelectMMD 2.18.0
Weiliang Qiu
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/GeneSelectMMD
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GeneSelectMMD
Version: 2.18.0
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL GeneSelectMMD
StartedAt: 2017-04-14 17:59:05 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 17:59:12 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 6.8 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL GeneSelectMMD
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘GeneSelectMMD’ ...
** libs
f95   -fpic  -g -O2  -Wall -c Qfunc.f -o Qfunc.o
f95   -fpic  -g -O2  -Wall -c blas.f -o blas.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c isnan.c -o isnan.o
f95   -fpic  -g -O2  -Wall -c lbfgsb.f -o lbfgsb.o
lbfgsb.f:1491:0:

                t(nbreak) = tu/neggi
 ^
Warning: ‘tu’ may be used uninitialized in this function [-Wmaybe-uninitialized]
lbfgsb.f:1482:0:

                t(nbreak) = tl/(-neggi)
 ^
Warning: ‘tl’ may be used uninitialized in this function [-Wmaybe-uninitialized]
f95   -fpic  -g -O2  -Wall -c lbfgsbDriver.f -o lbfgsbDriver.o
f95   -fpic  -g -O2  -Wall -c linpack.f -o linpack.o
f95   -fpic  -g -O2  -Wall -c llkhFun.f -o llkhFun.o
f95   -fpic  -g -O2  -Wall -c myTtest.f -o myTtest.o
f95   -fpic  -g -O2  -Wall -c paraEstLoop.f -o paraEstLoop.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c pt.c -o pt.o
f95   -fpic  -g -O2  -Wall -c timer.f -o timer.o
f95   -fpic  -g -O2  -Wall -c wiFun.f -o wiFun.o
gcc -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o GeneSelectMMD.so Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/GeneSelectMMD/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GeneSelectMMD)