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BUILD BIN report for easyRNASeq on tokay1

This page was generated on 2019-04-02 11:36:56 -0400 (Tue, 02 Apr 2019).

Package 447/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.18.3
Nicolas Delhomme
Snapshot Date: 2019-04-01 17:01:18 -0400 (Mon, 01 Apr 2019)
URL: https://git.bioconductor.org/packages/easyRNASeq
Branch: RELEASE_3_8
Last Commit: eae6fe0
Last Changed Date: 2019-01-04 13:05:21 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: easyRNASeq
Version: 2.18.3
Command: rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.18.3.tar.gz
StartedAt: 2019-04-02 06:29:09 -0400 (Tue, 02 Apr 2019)
EndedAt: 2019-04-02 06:29:50 -0400 (Tue, 02 Apr 2019)
EllapsedTime: 41.1 seconds
RetCode: 0
Status:  OK  
PackageFile: easyRNASeq_2.18.3.zip
PackageFileSize: 1011 KiB

Command output

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### Running command:
###
###   rm -rf easyRNASeq.buildbin-libdir && mkdir easyRNASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=easyRNASeq.buildbin-libdir easyRNASeq_2.18.3.tar.gz
###
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install for i386

* installing *source* package 'easyRNASeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'IRanges' for request: 'rev' when loading 'easyRNASeq'
Creating a generic function for 'basename' from package 'base' in package 'easyRNASeq'
Creating a generic function for 'file.exists' from package 'base' in package 'easyRNASeq'
** help
*** installing help indices
  converting help for package 'easyRNASeq'
    finding HTML links ... done
    DESeq-methods                           html  
    finding level-2 HTML links ... done

    GenomicRanges-methods                   html  
    IRanges-methods                         html  
    Rsamtools-methods                       html  
    ShortRead-methods                       html  
    basename-methods                        html  
    easyRNASeq-AnnotParam-accessors         html  
    easyRNASeq-AnnotParam-class             html  
    easyRNASeq-AnnotParam                   html  
    easyRNASeq-BamFileList                  html  
    easyRNASeq-BamParam-accessors           html  
    easyRNASeq-BamParam-class               html  
    easyRNASeq-BamParam                     html  
    easyRNASeq-RnaSeqParam-accessors        html  
    easyRNASeq-RnaSeqParam-class            html  
    easyRNASeq-RnaSeqParam                  html  
    easyRNASeq-accessors                    html  
    easyRNASeq-annotation-internal-methods
                                            html  
    easyRNASeq-annotation-methods           html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyQxwm1/R.INSTALL131018046223/easyRNASeq/man/easyRNASeq-annotation-methods.Rd:38: file link 'readGff3' in package 'genomeIntervals' does not exist and so has been treated as a topic
    easyRNASeq-class                        html  
    easyRNASeq-correction-methods           html  
    easyRNASeq-coverage-methods             html  
    easyRNASeq-datasets                     html  
    easyRNASeq-defunct-annotation-methods   html  
    easyRNASeq-defunct                      html  
    easyRNASeq-easyRNASeq                   html  
    easyRNASeq-global-variables             html  
    easyRNASeq-internal-AnnotParam-methods
                                            html  
    easyRNASeq-internal-methods             html  
    easyRNASeq-island-methods               html  
    easyRNASeq-package                      html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyQxwm1/R.INSTALL131018046223/easyRNASeq/man/easyRNASeq-package.Rd:133: file link 'BamFileList-class' in package 'Rsamtools' does not exist and so has been treated as a topic
    easyRNASeq-simpleRNASeq                 html  
    easyRNASeq-summarization-internal-methods
                                            html  
    easyRNASeq-summarization-methods        html  
    easyRNASeq-synthetic-transcripts        html  
    edgeR-methods                           html  
    file.exists-methods                     html  
    genomeIntervals-methods                 html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpyQxwm1/R.INSTALL131018046223/easyRNASeq/man/genomeIntervals-methods.Rd:39: file link 'readGff3' in package 'genomeIntervals' does not exist and so has been treated as a topic
    parallel-methods                        html  
    print-methods                           html  
    show-methods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'rev' when loading 'easyRNASeq'
In R CMD INSTALL

install for x64

* installing *source* package 'easyRNASeq' ...
** testing if installed package can be loaded
No methods found in package 'IRanges' for request: 'rev' when loading 'easyRNASeq'
* MD5 sums
packaged installation of 'easyRNASeq' as easyRNASeq_2.18.3.zip
* DONE (easyRNASeq)
In R CMD INSTALL
In R CMD INSTALL