N. Dean
| Snapshot Date: 2018-06-05 16:45:37 -0400 (Tue, 05 Jun 2018) |
| URL: https://git.bioconductor.org/packages/nudge |
| Branch: master |
| Last Commit: 910c50d |
| Last Changed Date: 2018-04-30 10:41:37 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2018-06-06 10:12:05 -0400 (Wed, 06 Jun 2018).
| Package 1007/1562 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| nudge 1.47.0 N. Dean
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ OK ] | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: nudge |
| Version: 1.47.0 |
| Command: C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:nudge.install-out.txt --library=C:\Users\biocbuild\bbs-3.8-bioc\R\library --no-vignettes --timings nudge_1.47.0.tar.gz |
| StartedAt: 2018-06-06 04:01:41 -0400 (Wed, 06 Jun 2018) |
| EndedAt: 2018-06-06 04:02:47 -0400 (Wed, 06 Jun 2018) |
| EllapsedTime: 65.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: nudge.Rcheck |
| Warnings: 0 |
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### Running command:
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### C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:nudge.install-out.txt --library=C:\Users\biocbuild\bbs-3.8-bioc\R\library --no-vignettes --timings nudge_1.47.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.8-bioc/meat/nudge.Rcheck'
* using R version 3.5.0 Patched (2018-05-03 r74699)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'nudge/DESCRIPTION' ... OK
* this is package 'nudge' version '1.47.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'nudge' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
norm2d 6.00 0 6.23
nudge2 5.13 0 5.39
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
nudge2 5.97 0.05 6.25
norm2d 5.79 0.01 6.05
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'C:/Users/biocbuild/bbs-3.8-bioc/meat/nudge.Rcheck/00check.log'
for details.
nudge.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/nudge_1.47.0.tar.gz && rm -rf nudge.buildbin-libdir && mkdir nudge.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nudge.buildbin-libdir nudge_1.47.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL nudge_1.47.0.zip && rm nudge_1.47.0.tar.gz nudge_1.47.0.zip
###
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install for i386
* installing *source* package 'nudge' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'nudge'
finding HTML links ... done
hiv html
like html
neg.contr html
norm1a html
norm1b html
norm1c html
norm1d html
norm2c html
norm2d html
nudge1 html
nudge2 html
pos.contr html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'nudge' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'nudge' as nudge_1.47.0.zip
* DONE (nudge)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'nudge' successfully unpacked and MD5 sums checked
In R CMD INSTALL
|
nudge.Rcheck/examples_i386/nudge-Ex.timings
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nudge.Rcheck/examples_x64/nudge-Ex.timings
|