Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 11:35:48 -0400 (Tue, 09 Apr 2019).
Package 364/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
CSSP 1.21.0 Chandler Zuo
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ OK ] | OK | OK | ![]() | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | ![]() | ||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() | ||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: CSSP |
Version: 1.21.0 |
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL CSSP |
StartedAt: 2019-04-08 17:58:13 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 17:58:22 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 8.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL CSSP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’ * installing *source* package ‘CSSP’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c bincount.c -o bincount.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c binpower.c -o binpower.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridLogMean.c -o gridLogMean.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridMGC.c -o gridMGC.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridMean.c -o gridMean.o gridMean.c: In function ‘gridMGCmean_c’: gridMean.c:10:63: warning: unused variable ‘counter’ [-Wunused-variable] R_len_t ng=REAL(ngrid)[0],k,i,j,l,ind[4],n=length(map),newG,counter; ^˜˜˜˜˜˜ gridMean.c: In function ‘gridMmean_c’: gridMean.c:177:63: warning: unused variable ‘counter’ [-Wunused-variable] R_len_t ng=REAL(ngrid)[0],k,i,j,l,ind[2],n=length(map),newG,counter; ^˜˜˜˜˜˜ gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridMode.c -o gridMode.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridNonpa.c -o gridNonpa.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c gridSample.c -o gridSample.o gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c tag2bin.c -o tag2bin.o gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o CSSP.so bincount.o binpower.o gridLogMean.o gridMGC.o gridMean.o gridMode.o gridNonpa.o gridSample.o tag2bin.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-CSSP/00new/CSSP/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CSSP)