Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-04-09 11:57:06 -0400 (Tue, 09 Apr 2019).
Package 1557/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
SSPA 2.23.1 Maarten van Iterson
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | ![]() | ||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() | ||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: SSPA |
Version: 2.23.1 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SSPA_2.23.1.tar.gz && rm -rf SSPA.buildbin-libdir && mkdir SSPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SSPA.buildbin-libdir SSPA_2.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SSPA_2.23.1.zip && rm SSPA_2.23.1.tar.gz SSPA_2.23.1.zip |
StartedAt: 2019-04-08 18:51:47 -0400 (Mon, 08 Apr 2019) |
EndedAt: 2019-04-08 18:52:33 -0400 (Mon, 08 Apr 2019) |
EllapsedTime: 46.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SSPA_2.23.1.tar.gz && rm -rf SSPA.buildbin-libdir && mkdir SSPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SSPA.buildbin-libdir SSPA_2.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SSPA_2.23.1.zip && rm SSPA_2.23.1.tar.gz SSPA_2.23.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 388k 100 388k 0 0 6447k 0 --:--:-- --:--:-- --:--:-- 7189k install for i386 * installing *source* package 'SSPA' ... ** libs C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o Rinit.c:12:1: warning: missing braces around initializer [-Wmissing-braces] }; ^ Rinit.c:12:1: warning: (near initialization for 'cMethods[2]') [-Wmissing-braces] C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c massdist.c -o massdist.o C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c nncg.c -o nncg.o C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def Rinit.o massdist.o nncg.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SSPA.buildbin-libdir/00LOCK-SSPA/00new/SSPA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SSPA' finding HTML links ... done Nutrigenomics html dbitri html deepSAGE html pbitri html pilotData html plot-methods html predictpower html qbitri html rbitri html sampleSize html show-methods html simdat html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SSPA' ... ** libs C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c Rinit.c -o Rinit.o Rinit.c:12:1: warning: missing braces around initializer [-Wmissing-braces] }; ^ Rinit.c:12:1: warning: (near initialization for 'cMethods[2]') [-Wmissing-braces] C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c massdist.c -o massdist.o C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c nncg.c -o nncg.o C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def Rinit.o massdist.o nncg.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SSPA.buildbin-libdir/SSPA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'SSPA' as SSPA_2.23.1.zip * DONE (SSPA) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'SSPA' successfully unpacked and MD5 sums checked