Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

BUILD report for nudge on merida2

This page was generated on 2018-10-29 10:38:23 -0400 (Mon, 29 Oct 2018).

Package 1065/1642HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nudge 1.47.1
N. Dean
Snapshot Date: 2018-10-28 16:46:29 -0400 (Sun, 28 Oct 2018)
URL: https://git.bioconductor.org/packages/nudge
Branch: master
Last Commit: ac7adf5
Last Changed Date: 2018-08-03 09:25:10 -0400 (Fri, 03 Aug 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: nudge
Version: 1.47.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data nudge
StartedAt: 2018-10-28 20:08:01 -0400 (Sun, 28 Oct 2018)
EndedAt: 2018-10-28 20:09:03 -0400 (Sun, 28 Oct 2018)
EllapsedTime: 62.2 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data nudge
###
##############################################################################
##############################################################################


* checking for file ‘nudge/DESCRIPTION’ ... OK
* preparing ‘nudge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Warning: Package 'nudge' is deprecated and will be removed from Bioconductor
  version 3.9
Warning in file(file, "rt") :
  cannot open URL 'https://www.stat.berkeley.edu/users/terry/zarray/Data/ApoA1/rg_a1ko_morph.txt': HTTP status was '404 Not Found'

Error: processing vignette 'nudge.vignette.Rnw' failed with diagnostics:
 chunk 26 
Error in file(file, "rt") : 
  cannot open the connection to 'http://www.stat.berkeley.edu/users/terry/zarray/Data/ApoA1/rg_a1ko_morph.txt'
Execution halted