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GPU-enabled build/check report for BioC 3.22
Report updated every 6 hours

This page was generated on 2025-07-13 10:45 -0400 (Sun, 13 Jul 2025).

HostnameOSArch (*)R versionInstalled pkgs
biocgpuLinux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 280
amaroneLinux (Ubuntu 24.04.2 LTS)x86_644.5.1 (2025-06-13) -- "Great Square Root" 281
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1/3HostnameOS / ArchINSTALLBUILDCHECK
orthos 1.7.2  (landing page)
Panagiotis Papasaikas
Snapshot Date: 2025-07-13 09:00 -0400 (Sun, 13 Jul 2025)
git_url: https://git.bioconductor.org/packages/orthos
git_branch: devel
git_last_commit: 758bf08
git_last_commit_date: 2025-07-01 03:49:05 -0400 (Tue, 01 Jul 2025)
biocgpuLinux (Ubuntu 24.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
amaroneLinux (Ubuntu 24.04.2 LTS) / x86_64  OK    ERROR  skipped


BUILD results for orthos on biocgpu

To the developers/maintainers of the orthos package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: orthos
Version: 1.7.2
Command: /home/biocbuild/bbs-3.22-bioc-gpu/R/bin/R CMD build --keep-empty-dirs --no-resave-data orthos
StartedAt: 2025-07-13 09:49:27 -0400 (Sun, 13 Jul 2025)
EndedAt: 2025-07-13 09:51:20 -0400 (Sun, 13 Jul 2025)
EllapsedTime: 113.0 seconds
RetCode: 0
Status:   OK  
PackageFile: orthos_1.7.2.tar.gz
PackageFileSize: 2.872 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc-gpu/R/bin/R CMD build --keep-empty-dirs --no-resave-data orthos
###
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* checking for file ‘orthos/DESCRIPTION’ ... OK
* preparing ‘orthos’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
* building ‘orthos_1.7.2.tar.gz’