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This page was generated on 2024-06-25 17:40 -0400 (Tue, 25 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4760
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4494
merida1macOS 12.7.4 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4508
kjohnson1macOS 13.6.6 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4466
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2054/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpliceWiz 1.6.0  (landing page)
Alex Chit Hei Wong
Snapshot Date: 2024-06-23 14:00 -0400 (Sun, 23 Jun 2024)
git_url: https://git.bioconductor.org/packages/SpliceWiz
git_branch: RELEASE_3_19
git_last_commit: 0677691
git_last_commit_date: 2024-04-30 11:43:22 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD results for SpliceWiz on nebbiolo1

To the developers/maintainers of the SpliceWiz package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpliceWiz.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SpliceWiz
Version: 1.6.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SpliceWiz
StartedAt: 2024-06-23 19:54:35 -0400 (Sun, 23 Jun 2024)
EndedAt: 2024-06-23 19:56:58 -0400 (Sun, 23 Jun 2024)
EllapsedTime: 143.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SpliceWiz
###
##############################################################################
##############################################################################


* checking for file ‘SpliceWiz/DESCRIPTION’ ... OK
* preparing ‘SpliceWiz’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘SW_Cookbook.Rmd’ using rmarkdown
--- finished re-building ‘SW_Cookbook.Rmd’

--- re-building ‘SW_QuickStart.Rmd’ using rmarkdown

Quitting from lines 340-347 [unnamed-chunk-16] (SW_QuickStart.Rmd)
Error: processing vignette 'SW_QuickStart.Rmd' failed with diagnostics:
file is not a database
--- failed re-building ‘SW_QuickStart.Rmd’

SUMMARY: processing the following file failed:
  ‘SW_QuickStart.Rmd’

Error: Vignette re-building failed.
Execution halted