Fabian Schmich
| Snapshot Date: 2024-07-07 14:00 -0400 (Sun, 07 Jul 2024) |
| git_url: https://git.bioconductor.org/packages/gespeR |
| git_branch: RELEASE_3_19 |
| git_last_commit: a1e0cc3 |
| git_last_commit_date: 2024-04-30 10:41:08 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-07-09 17:39 -0400 (Tue, 09 Jul 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4709 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4483 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4512 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4461 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 854/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| gespeR 1.36.0 (landing page) Fabian Schmich
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
|
To the developers/maintainers of the gespeR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gespeR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: gespeR |
| Version: 1.36.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gespeR |
| StartedAt: 2024-07-07 17:37:27 -0400 (Sun, 07 Jul 2024) |
| EndedAt: 2024-07-07 17:38:11 -0400 (Sun, 07 Jul 2024) |
| EllapsedTime: 44.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gespeR
###
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* checking for file ‘gespeR/DESCRIPTION’ ... OK
* preparing ‘gespeR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘gespeR.Rnw’ using knitr
Error: processing vignette 'gespeR.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'gespeR.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.94 \Rhref
{https://doi.org/10.18129/B9.bioc.gespeR}{doi:10.18129\slash{}B9....
?
! Emergency stop.
l.94 \Rhref
{https://doi.org/10.18129/B9.bioc.gespeR}{doi:10.18129\slash{}B9....
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘gespeR.Rnw’
SUMMARY: processing the following file failed:
‘gespeR.Rnw’
Error: Vignette re-building failed.
Execution halted