| Back to Build/check report for BioC 3.22 experimental data |
|
This page was generated on 2026-02-03 15:41 -0500 (Tue, 03 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4887 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 29/435 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| biscuiteerData 1.24.0 (landing page) "Jacob Morrison"
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | ||||||||
|
To the developers/maintainers of the biscuiteerData package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: biscuiteerData |
| Version: 1.24.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biscuiteerData |
| StartedAt: 2026-02-03 11:18:15 -0500 (Tue, 03 Feb 2026) |
| EndedAt: 2026-02-03 11:18:58 -0500 (Tue, 03 Feb 2026) |
| EllapsedTime: 42.9 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biscuiteerData
###
##############################################################################
##############################################################################
* checking for file ‘biscuiteerData/DESCRIPTION’ ... OK
* preparing ‘biscuiteerData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘biscuiteerData.Rmd’ using rmarkdown
Quitting from biscuiteerData.Rmd:44-46 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
no 'restart' 'muffleWarning' found
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Quitting from biscuiteerData.Rmd:44-46 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
invokeRestart("muffleWarning")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'biscuiteerData.Rmd' failed with diagnostics:
no 'restart' 'muffleWarning' found
--- failed re-building ‘biscuiteerData.Rmd’
SUMMARY: processing the following file failed:
‘biscuiteerData.Rmd’
Error: Vignette re-building failed.
Execution halted