Package: coRNAi

Version: 1.1.0

Command: E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings coRNAi_1.1.0.tar.gz

StartedAt: 2011-01-09 18:37:08 -0800 (Sun, 09 Jan 2011)

EndedAt: 2011-01-09 18:39:40 -0800 (Sun, 09 Jan 2011)

EllapsedTime: 152.4 seconds

RetCode: 0

Status:  OK

CheckDir: coRNAi.Rcheck

Warnings: 0

* using log directory 'E:/biocbld/bbs-2.8-bioc/meat/coRNAi.Rcheck'
* using R version 2.13.0 Under development (unstable) (2010-11-28 r53696)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'coRNAi/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'coRNAi' version '1.1.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'coRNAi' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'coRNAi' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: RColorBrewer
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: genefilter
Loading required package: splots
Loading required package: vsn
Loading required package: hwriter
Loading required package: locfit
Loading required package: akima
Loading required package: lattice
locfit 1.5-6 	 2010-01-20 
Loading required package: grid
Scalable Robust Estimators with High Breakdown Point (version 1.1-00)
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (coRNAi)

name	user	system	elapsed
BoxPlotShorth	0.72	0.01	0.74
InteractGraph	0	0	0
InteractLevelPlot	0.68	0.00	0.71
MainFitPlot	0.03	0.00	0.03
PlotHeatmap	0.68	0.00	0.69
Pplot	0	0	0
cellHTS2df	0.39	0.02	0.40
cortestmatrices	9.23	0.00	9.42
data2graph	0	0	0
df2array	0.55	0.00	0.55
df2fitmatrix	0.89	0.02	0.91
df2lmFit	0.69	0.00	0.69
estmodel	0.57	0.01	0.59
faultyscreen	0.10	0.00	0.09
interactiontable	0.04	0.00	0.03
key	0	0	0
repplots	29.67	0.19	30.45
rlmmain	0.75	0.01	0.76
screen1_raw	0.01	0.00	0.02
screen2_raw	0.11	0.00	0.10
signalplots	0.78	0.00	0.83
tt2matrix	0	0	0
updateDf	0.44	0.02	0.45
weightDf	0.42	0.00	0.44