Multiple platform build/check report for BioC 3.23 - CHECK results for graper on kjohnson3

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.3 LTS)	x86_64	R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences"	4827
lconway	macOS 12.7.6 Monterey	x86_64	R Under development (unstable) (2025-10-21 r88958) -- "Unsuffered Consequences"	4600
kjohnson3	macOS 13.7.7 Ventura	arm64	R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"	4564
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on kjohnson3

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.27.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz

StartedAt: 2025-11-18 20:24:03 -0500 (Tue, 18 Nov 2025)

EndedAt: 2025-11-18 20:24:35 -0500 (Tue, 18 Nov 2025)

EllapsedTime: 31.4 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2025-11-04 r88984)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.7.8
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
* used SDK: ‘MacOSX11.3.1.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2025-11-04 r88984) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-814.746
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.211
ELB improved by 249.535

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.263
ELB improved by 61.9473

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.089
ELB improved by 42.1743

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.092
ELB improved by 20.9972

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.105
ELB improved by 9.98687

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.646
ELB improved by 6.45851

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.959
ELB improved by 5.68722

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.365
ELB improved by 5.59449

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.004
ELB improved by 5.3611

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.399
ELB improved by 4.60415

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.94
ELB improved by 3.45909

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.573
ELB improved by 2.36775

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.005
ELB improved by 1.56782

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.948
ELB improved by 1.05702

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.186
ELB improved by 0.761284

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.588
ELB improved by 0.598859

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.088
ELB improved by 0.499347

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.676
ELB improved by 0.411989

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.356
ELB improved by 0.320353

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.116
ELB improved by 0.239835

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.934
ELB improved by 0.182167

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.79
ELB improved by 0.14399

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.672
ELB improved by 0.118147

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.572
ELB improved by 0.0995825

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.487
ELB improved by 0.0854695

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.412
ELB improved by 0.0742865

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.347
ELB improved by 0.0651755

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.29
ELB improved by 0.0576132

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.238
ELB improved by 0.0512537

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.193
ELB improved by 0.0458531

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.151
ELB improved by 0.0412316

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.114
ELB improved by 0.0372516

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.08
ELB improved by 0.0338059

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.049
ELB improved by 0.0308088

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.021
ELB improved by 0.0281918

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.995
ELB improved by 0.0258987

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.971
ELB improved by 0.0238833

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.949
ELB improved by 0.0221077

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.929
ELB improved by 0.0205398

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.91
ELB improved by 0.019153

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.892
ELB improved by 0.0179249

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.875
ELB improved by 0.0168362

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.859
ELB improved by 0.0158708

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.844
ELB improved by 0.0150147

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.83
ELB improved by 0.014256

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.816
ELB improved by 0.0135846

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.803
ELB improved by 0.0129915

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.791
ELB improved by 0.0124691

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.779
ELB improved by 0.0120109

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.767
ELB improved by 0.0116111

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.756
ELB improved by 0.0112647

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.745
ELB improved by 0.0109675

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.734
ELB improved by 0.0107157

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.724
ELB improved by 0.0105062

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.713
ELB improved by 0.0103362

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.703
ELB improved by 0.0102033

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.693
ELB improved by 0.0101055

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.683
ELB improved by 0.0100411

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.673
ELB improved by 0.0100087

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.663
ELB improved by 0.0100072

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.653
ELB improved by 0.0100357

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.643
ELB improved by 0.0100934

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.633
ELB improved by 0.0101799

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.622
ELB improved by 0.0102949

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.612
ELB improved by 0.0104383

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.601
ELB improved by 0.0106101

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.591
ELB improved by 0.0108105

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.579
ELB improved by 0.0110398

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.568
ELB improved by 0.0112985

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.557
ELB improved by 0.0115873

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.545
ELB improved by 0.0119068

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.532
ELB improved by 0.0122578

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.52
ELB improved by 0.0126414

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.507
ELB improved by 0.0130584

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.493
ELB improved by 0.0135101

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.479
ELB improved by 0.0139975

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.465
ELB improved by 0.0145219

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.45
ELB improved by 0.0150844

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.434
ELB improved by 0.0156862

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.418
ELB improved by 0.0163284

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.401
ELB improved by 0.0170121

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.383
ELB improved by 0.0177381

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.364
ELB improved by 0.0185072

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.345
ELB improved by 0.0193197

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.325
ELB improved by 0.0201759

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.304
ELB improved by 0.0210753

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.282
ELB improved by 0.0220173

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.259
ELB improved by 0.0230006

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.235
ELB improved by 0.0240231

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.21
ELB improved by 0.0250822

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.183
ELB improved by 0.0261743

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.156
ELB improved by 0.0272948

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.128
ELB improved by 0.0284384

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.098
ELB improved by 0.0295986

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.067
ELB improved by 0.0307677

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.035
ELB improved by 0.031937

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.002
ELB improved by 0.033097

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.968
ELB improved by 0.0342367

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.933
ELB improved by 0.0353445

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.896
ELB improved by 0.036408

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.859
ELB improved by 0.0374141

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.821
ELB improved by 0.0383495

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.781
ELB improved by 0.0392007

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.741
ELB improved by 0.0399546

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.701
ELB improved by 0.0405986

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.66
ELB improved by 0.0411214

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.618
ELB improved by 0.041513

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.576
ELB improved by 0.0417652

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.535
ELB improved by 0.0418723

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.493
ELB improved by 0.0418309

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.451
ELB improved by 0.0416405

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.41
ELB improved by 0.0413035

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.369
ELB improved by 0.0408252

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.329
ELB improved by 0.0402137

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.289
ELB improved by 0.0394793

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.251
ELB improved by 0.0386347

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.213
ELB improved by 0.0376941

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.176
ELB improved by 0.0366727

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.141
ELB improved by 0.0355861

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.106
ELB improved by 0.0344497

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.073
ELB improved by 0.0332783

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.041
ELB improved by 0.0320855

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.01
ELB improved by 0.0308832

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.98
ELB improved by 0.0296814

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.952
ELB improved by 0.0284881

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.924
ELB improved by 0.0273093

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.898
ELB improved by 0.0261487

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.873
ELB improved by 0.0250088

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.849
ELB improved by 0.0238901

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.827
ELB improved by 0.0227926

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.805
ELB improved by 0.0217157

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.784
ELB improved by 0.0206589

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.765
ELB improved by 0.0196219

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.746
ELB improved by 0.0186055

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.728
ELB improved by 0.0176113

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.712
ELB improved by 0.0166416

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.696
ELB improved by 0.0156995

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.681
ELB improved by 0.0147882

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.667
ELB improved by 0.0139109

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.654
ELB improved by 0.0130705

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.642
ELB improved by 0.0122691

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.631
ELB improved by 0.0115082

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.62
ELB improved by 0.0107885

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.61
ELB improved by 0.0101099

iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.6
ELB improved by 0.00947181

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-905.294
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-579.572
ELB improved by 325.723

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-523.514
ELB improved by 56.0573

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.433
ELB improved by 35.0812

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.835
ELB improved by 15.5985

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.562
ELB improved by 7.27234

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.404
ELB improved by 5.15814

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.941
ELB improved by 4.46372

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.653
ELB improved by 4.28739

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.334
ELB improved by 4.3194

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.978
ELB improved by 4.35611

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.789
ELB improved by 4.18869

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.09
ELB improved by 3.69947

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.115
ELB improved by 2.97476

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.899
ELB improved by 2.21589

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.322
ELB improved by 1.57726

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.215
ELB improved by 1.10636

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.435
ELB improved by 0.779981

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.877
ELB improved by 0.558235

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.468
ELB improved by 0.409295

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.158
ELB improved by 0.310171

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.914
ELB improved by 0.243582

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.717
ELB improved by 0.19737

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.553
ELB improved by 0.163856

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.414
ELB improved by 0.138508

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.296
ELB improved by 0.118675

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.193
ELB improved by 0.102757

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.103
ELB improved by 0.0897418

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.024
ELB improved by 0.0789499

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.954
ELB improved by 0.0699026

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.892
ELB improved by 0.0622485

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.836
ELB improved by 0.0557225

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.786
ELB improved by 0.0501197

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.741
ELB improved by 0.0452793

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.7
ELB improved by 0.0410735

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.662
ELB improved by 0.0373998

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.628
ELB improved by 0.0341752

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.597
ELB improved by 0.0313318

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.568
ELB improved by 0.0288143

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.542
ELB improved by 0.0265767

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.517
ELB improved by 0.0245808

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.494
ELB improved by 0.0227947

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.473
ELB improved by 0.0211915

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.453
ELB improved by 0.0197487

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.435
ELB improved by 0.0184468

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.418
ELB improved by 0.0172693

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.401
ELB improved by 0.0162022

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.386
ELB improved by 0.0152332

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.372
ELB improved by 0.0143516

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.358
ELB improved by 0.0135483

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.345
ELB improved by 0.0128153

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.333
ELB improved by 0.0121454

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.322
ELB improved by 0.0115325

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.311
ELB improved by 0.0109711

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.3
ELB improved by 0.0104563

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.29
ELB improved by 0.00998395

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-843.598
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-552.616
ELB improved by 290.982

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.584
ELB improved by 58.0322

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.169
ELB improved by 31.4155

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.047
ELB improved by 13.1212

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.467
ELB improved by 5.58055

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.835
ELB improved by 3.63178

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.69
ELB improved by 3.14475

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.705
ELB improved by 2.98505

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.802
ELB improved by 2.90304

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.004
ELB improved by 2.79826

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.394
ELB improved by 2.61027

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.084
ELB improved by 2.30998

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.159
ELB improved by 1.92423

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.632
ELB improved by 1.52727

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.445
ELB improved by 1.18725

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.514
ELB improved by 0.930361

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.767
ELB improved by 0.747716

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.15
ELB improved by 0.617215

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.631
ELB improved by 0.518494

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.193
ELB improved by 0.437854

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.825
ELB improved by 0.368457

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.515
ELB improved by 0.309629

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.251
ELB improved by 0.263924

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.017
ELB improved by 0.233692

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.796
ELB improved by 0.221118

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.565
ELB improved by 0.231508

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.288
ELB improved by 0.276628

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.921
ELB improved by 0.367554

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.442
ELB improved by 0.479124

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.907
ELB improved by 0.534994

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.412
ELB improved by 0.494925

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.013
ELB improved by 0.398474

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.715
ELB improved by 0.298126

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.495
ELB improved by 0.219898

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.327
ELB improved by 0.168129

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.19
ELB improved by 0.136784

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.072
ELB improved by 0.118138

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.965
ELB improved by 0.106616

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.866
ELB improved by 0.0990244

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.773
ELB improved by 0.0937232

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.683
ELB improved by 0.0898968

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.596
ELB improved by 0.0871349

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.51
ELB improved by 0.0852209

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.426
ELB improved by 0.0840329

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.343
ELB improved by 0.0834985

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.259
ELB improved by 0.0835745

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.175
ELB improved by 0.0842387

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.09
ELB improved by 0.085487

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.002
ELB improved by 0.0873332

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.912
ELB improved by 0.0898111

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.819
ELB improved by 0.092976

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.723
ELB improved by 0.0969075

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.621
ELB improved by 0.101712

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.513
ELB improved by 0.107529

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.399
ELB improved by 0.114535

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.276
ELB improved by 0.122958

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.143
ELB improved by 0.133086

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.997
ELB improved by 0.145278

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.838
ELB improved by 0.159981

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.66
ELB improved by 0.17772

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.461
ELB improved by 0.199082

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.236
ELB improved by 0.224648

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.981
ELB improved by 0.254861

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.691
ELB improved by 0.289826

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.362
ELB improved by 0.329035

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.991
ELB improved by 0.371114

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.578
ELB improved by 0.413643

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.124
ELB improved by 0.453091

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.64
ELB improved by 0.484805

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.136
ELB improved by 0.503184

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.634
ELB improved by 0.502669

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.154
ELB improved by 0.48028

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.715
ELB improved by 0.438447

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.33
ELB improved by 0.385002

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403
ELB improved by 0.329852

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.719
ELB improved by 0.28155

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.473
ELB improved by 0.245915

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.247
ELB improved by 0.225898

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.027
ELB improved by 0.220233

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.807
ELB improved by 0.219627

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.599
ELB improved by 0.208083

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.42
ELB improved by 0.179029

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.277
ELB improved by 0.143106

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.165
ELB improved by 0.111899

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.076
ELB improved by 0.0885742

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.005
ELB improved by 0.07169

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.946
ELB improved by 0.0590402

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.897
ELB improved by 0.0489464

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.856
ELB improved by 0.0404598

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.823
ELB improved by 0.0331964

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.796
ELB improved by 0.0270615

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.774
ELB improved by 0.0220214

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.756
ELB improved by 0.0179947

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.741
ELB improved by 0.0148439

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.729
ELB improved by 0.0124063

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.718
ELB improved by 0.0105257

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.709
ELB improved by 0.00906894

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-844.348
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.103
ELB improved by 276.245

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.031
ELB improved by 60.0724

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-472.198
ELB improved by 35.8325

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.034
ELB improved by 15.1641

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.162
ELB improved by 6.87221

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.702
ELB improved by 4.45943

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.59
ELB improved by 4.11192

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.271
ELB improved by 4.31912

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.582
ELB improved by 4.68945

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.58
ELB improved by 5.00154

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.618
ELB improved by 4.96189

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.268
ELB improved by 4.35038

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.986
ELB improved by 3.28234

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.835
ELB improved by 2.15117

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.491
ELB improved by 1.34371

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.6
ELB improved by 0.890699

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.941
ELB improved by 0.659008

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.4
ELB improved by 0.541345

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.92
ELB improved by 0.480155

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.472
ELB improved by 0.447831

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.041
ELB improved by 0.431195

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.617
ELB improved by 0.42382

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.194
ELB improved by 0.422847

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.766
ELB improved by 0.428075

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.323
ELB improved by 0.442429

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.85
ELB improved by 0.473146

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.321
ELB improved by 0.52926

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.721
ELB improved by 0.600174

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.087
ELB improved by 0.633439

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.479
ELB improved by 0.608048

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.911
ELB improved by 0.56796

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.374
ELB improved by 0.537574

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.858
ELB improved by 0.515425

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.362
ELB improved by 0.496837

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.883
ELB improved by 0.478757

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.424
ELB improved by 0.459041

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.988
ELB improved by 0.435858

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.58
ELB improved by 0.407688

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.207
ELB improved by 0.373687

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.872
ELB improved by 0.334133

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.582
ELB improved by 0.290601

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.336
ELB improved by 0.245668

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.134
ELB improved by 0.202217

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.971
ELB improved by 0.162685

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.843
ELB improved by 0.128599

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.742
ELB improved by 0.100496

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.664
ELB improved by 0.0781324

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.603
ELB improved by 0.0608024

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.556
ELB improved by 0.0476166

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.518
ELB improved by 0.0376952

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.488
ELB improved by 0.0302668

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.463
ELB improved by 0.0247029

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.442
ELB improved by 0.0205151

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.425
ELB improved by 0.0173353

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.41
ELB improved by 0.014892

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.397
ELB improved by 0.0129876

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.386
ELB improved by 0.011479

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.375
ELB improved by 0.0102637

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.366
ELB improved by 0.00926762

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  1.063   0.092   1.175

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.013	0.006	0.019
getPIPs	0.012	0.006	0.017
graper	0.025	0.010	0.037
makeExampleData	0.002	0.000	0.002
makeExampleDataWithUnequalGroups	0.002	0.000	0.003
plotELBO	0.117	0.008	0.124
plotGroupPenalties	0.429	0.012	0.449
plotPosterior	0.211	0.009	0.233
predict.graper	0.214	0.025	0.241
print.graper	0.012	0.005	0.016