Back to Build/check report for BioC 3.23 experimental data
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This page was generated on 2025-10-30 15:01 -0400 (Thu, 30 Oct 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.3 LTS)x86_64R Under development (unstable) (2025-10-20 r88955) -- "Unsuffered Consequences" 4428
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 113/430HostnameOS / ArchINSTALLBUILDCHECK
emtdata 1.19.0  (landing page)
Malvika D. Kharbanda
Snapshot Date: 2025-10-30 07:00 -0400 (Thu, 30 Oct 2025)
git_url: https://git.bioconductor.org/packages/emtdata
git_branch: devel
git_last_commit: dd35ae5
git_last_commit_date: 2025-10-29 10:03:42 -0400 (Wed, 29 Oct 2025)
nebbiolo1Linux (Ubuntu 24.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for emtdata on nebbiolo1

To the developers/maintainers of the emtdata package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: emtdata
Version: 1.19.0
Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data emtdata
StartedAt: 2025-10-30 11:14:30 -0400 (Thu, 30 Oct 2025)
EndedAt: 2025-10-30 11:14:41 -0400 (Thu, 30 Oct 2025)
EllapsedTime: 10.9 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data emtdata
###
##############################################################################
##############################################################################


* checking for file ‘emtdata/DESCRIPTION’ ... OK
* preparing ‘emtdata’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘emtdataR.Rmd’ using rmarkdown

Quitting from emtdataR.Rmd:31-35 [install]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! unknown Bioconductor version '3.23'; see https://bioconductor.org/install
---
Backtrace:
    ▆
 1. └─BiocManager::install("emtdata")
 2.   └─BiocManager:::.version_validate(version)
 3.     ├─base::ifelse(.is_CRAN_check(), .message(txt), .stop(txt))
 4.     └─BiocManager:::.stop(txt)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'emtdataR.Rmd' failed with diagnostics:
unknown Bioconductor version '3.23'; see https://bioconductor.org/install
--- failed re-building ‘emtdataR.Rmd’

SUMMARY: processing the following file failed:
  ‘emtdataR.Rmd’

Error: Vignette re-building failed.
Execution halted