Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-10-11 20:41 -0400 (Fri, 11 Oct 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4763 |
palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4500 |
merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4529 |
kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4479 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 987/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.10.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.10.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.10.0.tar.gz |
StartedAt: 2024-10-10 06:42:15 -0400 (Thu, 10 Oct 2024) |
EndedAt: 2024-10-10 06:51:18 -0400 (Thu, 10 Oct 2024) |
EllapsedTime: 542.6 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.19-bioc/meat/HPiP.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: x86_64-apple-darwin20 * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.6 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.10.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed FSmethod 51.721 1.851 61.821 corr_plot 51.584 1.853 62.289 var_imp 50.913 1.775 62.232 pred_ensembel 24.530 0.511 24.637 calculateTC 4.803 0.525 6.161 enrichfindP 0.902 0.080 14.077 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/Users/biocbuild/bbs-3.19-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 99.491548 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.739882 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 110.336237 iter 10 value 94.026544 final value 94.026542 converged Fitting Repeat 4 # weights: 103 initial value 94.719128 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 103.190539 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 98.350532 iter 10 value 92.400924 final value 92.232622 converged Fitting Repeat 2 # weights: 305 initial value 113.030929 iter 10 value 94.484236 iter 10 value 94.484236 final value 94.484212 converged Fitting Repeat 3 # weights: 305 initial value 94.930989 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 94.699942 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 116.700712 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 101.361587 final value 94.026542 converged Fitting Repeat 2 # weights: 507 initial value 118.665411 final value 94.484209 converged Fitting Repeat 3 # weights: 507 initial value 97.402185 iter 10 value 88.997890 iter 20 value 86.924521 final value 86.916972 converged Fitting Repeat 4 # weights: 507 initial value 96.193146 iter 10 value 94.343373 iter 20 value 94.097017 iter 30 value 93.100778 iter 40 value 87.185489 iter 50 value 87.166330 final value 87.166217 converged Fitting Repeat 5 # weights: 507 initial value 118.830036 iter 10 value 94.165118 final value 94.165117 converged Fitting Repeat 1 # weights: 103 initial value 97.277532 iter 10 value 94.195454 iter 20 value 90.772038 iter 30 value 86.972678 iter 40 value 85.179093 iter 50 value 82.830329 iter 60 value 80.812492 iter 70 value 80.212879 iter 80 value 79.579144 iter 90 value 79.565907 iter 100 value 79.513539 final value 79.513539 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.438625 iter 10 value 94.480477 iter 20 value 85.931878 iter 30 value 83.180298 iter 40 value 82.918125 iter 50 value 82.418403 iter 60 value 82.361584 iter 70 value 82.244942 final value 82.234992 converged Fitting Repeat 3 # weights: 103 initial value 96.879933 iter 10 value 94.212099 iter 20 value 85.882325 iter 30 value 83.264176 iter 40 value 82.366419 iter 50 value 81.936520 iter 60 value 81.891864 iter 70 value 81.793861 iter 80 value 81.779623 final value 81.779609 converged Fitting Repeat 4 # weights: 103 initial value 118.238660 iter 10 value 94.275321 iter 20 value 93.642880 iter 30 value 93.640664 iter 40 value 93.515238 iter 50 value 85.920934 iter 60 value 85.658389 iter 70 value 82.534854 iter 80 value 81.900166 iter 90 value 81.817261 iter 100 value 81.786081 final value 81.786081 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.955350 iter 10 value 94.486600 iter 20 value 93.768742 iter 30 value 93.511076 iter 40 value 90.855098 iter 50 value 81.919682 iter 60 value 80.763125 iter 70 value 80.394852 iter 80 value 79.809451 iter 90 value 79.518893 final value 79.514500 converged Fitting Repeat 1 # weights: 305 initial value 113.768405 iter 10 value 94.493914 iter 20 value 90.611065 iter 30 value 84.847538 iter 40 value 82.723172 iter 50 value 82.302126 iter 60 value 79.764351 iter 70 value 79.322113 iter 80 value 79.132929 iter 90 value 79.001081 iter 100 value 78.696488 final value 78.696488 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 120.979568 iter 10 value 94.642293 iter 20 value 94.037625 iter 30 value 92.191384 iter 40 value 90.638309 iter 50 value 84.784773 iter 60 value 83.161771 iter 70 value 82.795423 iter 80 value 81.917904 iter 90 value 79.781531 iter 100 value 79.028801 final value 79.028801 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 121.559991 iter 10 value 95.249767 iter 20 value 94.255908 iter 30 value 89.534857 iter 40 value 85.455679 iter 50 value 82.562403 iter 60 value 79.705112 iter 70 value 79.081471 iter 80 value 78.793268 iter 90 value 78.726576 iter 100 value 78.498989 final value 78.498989 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.398540 iter 10 value 94.486768 iter 20 value 93.506524 iter 30 value 91.553928 iter 40 value 89.336946 iter 50 value 81.818415 iter 60 value 79.993562 iter 70 value 79.762208 iter 80 value 79.261455 iter 90 value 79.162137 iter 100 value 79.092579 final value 79.092579 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.839060 iter 10 value 94.472238 iter 20 value 84.560714 iter 30 value 83.771968 iter 40 value 83.566438 iter 50 value 81.665801 iter 60 value 79.732560 iter 70 value 79.299014 iter 80 value 78.975512 iter 90 value 78.861132 iter 100 value 78.749801 final value 78.749801 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.366633 iter 10 value 94.196661 iter 20 value 90.594274 iter 30 value 85.853267 iter 40 value 82.840581 iter 50 value 80.655931 iter 60 value 79.292223 iter 70 value 78.933575 iter 80 value 78.457421 iter 90 value 77.679237 iter 100 value 77.625344 final value 77.625344 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.210093 iter 10 value 85.641602 iter 20 value 83.898839 iter 30 value 82.468079 iter 40 value 82.166888 iter 50 value 81.937747 iter 60 value 81.338387 iter 70 value 79.808145 iter 80 value 78.824606 iter 90 value 78.521627 iter 100 value 78.162554 final value 78.162554 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 128.737222 iter 10 value 92.455643 iter 20 value 86.236551 iter 30 value 85.529787 iter 40 value 82.529407 iter 50 value 82.095480 iter 60 value 81.515371 iter 70 value 80.747987 iter 80 value 79.833354 iter 90 value 78.258488 iter 100 value 77.627247 final value 77.627247 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.726874 iter 10 value 94.151830 iter 20 value 93.820973 iter 30 value 85.115733 iter 40 value 82.286360 iter 50 value 79.921090 iter 60 value 78.355795 iter 70 value 77.990344 iter 80 value 77.854905 iter 90 value 77.752755 iter 100 value 77.713797 final value 77.713797 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.221462 iter 10 value 94.482050 iter 20 value 93.254181 iter 30 value 85.187916 iter 40 value 81.464498 iter 50 value 80.718024 iter 60 value 79.970245 iter 70 value 79.338256 iter 80 value 78.791601 iter 90 value 78.220134 iter 100 value 77.924326 final value 77.924326 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.312381 final value 94.486371 converged Fitting Repeat 2 # weights: 103 initial value 95.456546 final value 94.166801 converged Fitting Repeat 3 # weights: 103 initial value 98.569817 iter 10 value 94.485735 iter 20 value 94.481038 iter 30 value 93.095915 iter 40 value 91.629363 iter 50 value 91.507155 iter 60 value 91.276415 iter 70 value 91.204572 iter 80 value 91.202589 final value 91.202565 converged Fitting Repeat 4 # weights: 103 initial value 97.489116 final value 94.485941 converged Fitting Repeat 5 # weights: 103 initial value 96.167090 final value 94.485855 converged Fitting Repeat 1 # weights: 305 initial value 105.711919 iter 10 value 94.488977 iter 20 value 94.484226 iter 30 value 94.001985 iter 40 value 90.325017 iter 50 value 83.136740 iter 60 value 80.047237 iter 70 value 79.164639 iter 80 value 78.424906 iter 90 value 78.406588 iter 100 value 78.380095 final value 78.380095 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.045203 iter 10 value 94.490338 iter 20 value 93.725126 iter 30 value 89.233000 iter 40 value 89.167874 iter 50 value 89.065356 iter 60 value 88.600361 iter 70 value 80.901574 iter 80 value 80.566675 iter 90 value 80.563198 iter 100 value 80.556785 final value 80.556785 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.725003 iter 10 value 93.388733 iter 20 value 84.487729 iter 30 value 84.484386 iter 40 value 84.478676 iter 50 value 84.470945 iter 60 value 83.322006 iter 70 value 83.272097 iter 80 value 83.113042 final value 83.112575 converged Fitting Repeat 4 # weights: 305 initial value 106.450126 iter 10 value 94.488928 iter 20 value 91.747289 iter 30 value 86.483007 iter 40 value 84.908505 iter 50 value 84.678353 iter 60 value 84.361068 iter 70 value 84.097925 iter 80 value 82.612547 iter 90 value 82.015448 final value 82.015060 converged Fitting Repeat 5 # weights: 305 initial value 106.534785 iter 10 value 94.489151 iter 20 value 94.484448 iter 30 value 93.779880 final value 93.323458 converged Fitting Repeat 1 # weights: 507 initial value 99.768410 iter 10 value 94.491695 iter 20 value 94.455827 iter 30 value 94.311933 final value 94.026796 converged Fitting Repeat 2 # weights: 507 initial value 110.994063 iter 10 value 94.489451 iter 20 value 94.027150 final value 94.026917 converged Fitting Repeat 3 # weights: 507 initial value 116.595901 iter 10 value 90.347224 iter 20 value 89.942105 iter 30 value 89.935778 iter 40 value 86.828060 iter 50 value 81.777911 iter 60 value 78.859267 iter 70 value 78.768243 iter 80 value 78.766111 iter 90 value 78.738697 iter 100 value 78.732376 final value 78.732376 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.429450 iter 10 value 94.493084 iter 20 value 94.439900 iter 30 value 85.442257 iter 40 value 83.102554 iter 50 value 83.100304 iter 60 value 83.100187 iter 70 value 83.029766 final value 83.003155 converged Fitting Repeat 5 # weights: 507 initial value 104.273657 iter 10 value 94.492108 iter 20 value 89.527562 iter 30 value 86.143245 iter 40 value 85.936106 iter 50 value 84.429632 iter 60 value 79.310716 iter 70 value 78.407782 iter 80 value 78.148326 iter 90 value 78.148135 iter 100 value 78.145242 final value 78.145242 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.798630 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 104.419172 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 115.112937 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.029366 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.297789 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 105.017222 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 118.020126 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 111.020853 iter 10 value 94.291892 iter 10 value 94.291892 iter 10 value 94.291892 final value 94.291892 converged Fitting Repeat 4 # weights: 305 initial value 103.531100 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 136.036846 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 107.557849 iter 10 value 87.541225 iter 20 value 86.621149 final value 86.621137 converged Fitting Repeat 2 # weights: 507 initial value 101.453055 final value 94.291892 converged Fitting Repeat 3 # weights: 507 initial value 99.624536 iter 10 value 94.294841 iter 20 value 94.291627 final value 94.290196 converged Fitting Repeat 4 # weights: 507 initial value 99.340485 final value 94.484210 converged Fitting Repeat 5 # weights: 507 initial value 121.980930 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 97.591461 iter 10 value 94.479766 iter 20 value 93.267519 iter 30 value 92.812576 iter 40 value 92.755392 iter 50 value 92.746942 iter 60 value 92.744380 iter 70 value 92.743706 final value 92.742738 converged Fitting Repeat 2 # weights: 103 initial value 103.041736 iter 10 value 94.481458 iter 20 value 90.425776 iter 30 value 87.719184 iter 40 value 87.016552 iter 50 value 86.322535 iter 60 value 85.876537 iter 70 value 84.848873 iter 80 value 83.743952 iter 90 value 83.686939 iter 100 value 83.671953 final value 83.671953 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.158981 iter 10 value 94.494356 iter 20 value 94.465634 iter 30 value 88.075478 iter 40 value 86.987316 iter 50 value 86.001250 iter 60 value 83.882539 iter 70 value 83.610922 iter 80 value 83.558848 final value 83.557582 converged Fitting Repeat 4 # weights: 103 initial value 98.172661 iter 10 value 94.395708 iter 20 value 94.354338 iter 30 value 92.087972 iter 40 value 87.233577 iter 50 value 86.821407 iter 60 value 86.526906 iter 70 value 86.180303 iter 80 value 86.084202 iter 90 value 86.058302 iter 100 value 85.999729 final value 85.999729 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 107.144654 iter 10 value 93.097798 iter 20 value 90.060118 iter 30 value 87.735757 iter 40 value 87.259838 iter 50 value 86.875663 iter 60 value 86.803868 iter 70 value 86.108409 iter 80 value 85.243649 iter 90 value 83.563845 final value 83.557582 converged Fitting Repeat 1 # weights: 305 initial value 101.860731 iter 10 value 94.716091 iter 20 value 94.081601 iter 30 value 88.000209 iter 40 value 87.121260 iter 50 value 83.665769 iter 60 value 83.429907 iter 70 value 83.025402 iter 80 value 82.490791 iter 90 value 81.747171 iter 100 value 81.575052 final value 81.575052 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 106.648909 iter 10 value 90.834185 iter 20 value 87.536521 iter 30 value 86.376997 iter 40 value 85.894471 iter 50 value 85.748784 iter 60 value 85.732414 iter 70 value 85.587955 iter 80 value 85.557110 iter 90 value 83.594596 iter 100 value 82.866446 final value 82.866446 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.359757 iter 10 value 94.575053 iter 20 value 86.692055 iter 30 value 86.044429 iter 40 value 85.175625 iter 50 value 81.300637 iter 60 value 81.070826 iter 70 value 80.765553 iter 80 value 80.719455 iter 90 value 80.677784 iter 100 value 80.627763 final value 80.627763 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.504541 iter 10 value 94.432021 iter 20 value 88.225575 iter 30 value 86.977612 iter 40 value 84.661308 iter 50 value 84.411471 iter 60 value 82.700160 iter 70 value 80.548549 iter 80 value 80.341947 iter 90 value 79.785966 iter 100 value 79.671855 final value 79.671855 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.337702 iter 10 value 94.610745 iter 20 value 89.379955 iter 30 value 87.425310 iter 40 value 85.977778 iter 50 value 85.310151 iter 60 value 82.602738 iter 70 value 81.919862 iter 80 value 81.240245 iter 90 value 80.499317 iter 100 value 80.350770 final value 80.350770 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.657619 iter 10 value 95.102772 iter 20 value 88.796699 iter 30 value 87.178809 iter 40 value 86.422541 iter 50 value 85.816613 iter 60 value 84.197263 iter 70 value 83.443394 iter 80 value 82.459679 iter 90 value 81.415945 iter 100 value 80.701307 final value 80.701307 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 126.203750 iter 10 value 96.590021 iter 20 value 93.881897 iter 30 value 91.325554 iter 40 value 85.310876 iter 50 value 84.227154 iter 60 value 83.667085 iter 70 value 83.592977 iter 80 value 82.194496 iter 90 value 81.661919 iter 100 value 81.048215 final value 81.048215 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.889098 iter 10 value 88.977015 iter 20 value 87.649357 iter 30 value 83.695892 iter 40 value 83.154340 iter 50 value 83.096957 iter 60 value 82.917292 iter 70 value 81.092447 iter 80 value 80.447330 iter 90 value 79.908909 iter 100 value 79.729777 final value 79.729777 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 118.575362 iter 10 value 94.455134 iter 20 value 87.560194 iter 30 value 86.167599 iter 40 value 83.060436 iter 50 value 81.533183 iter 60 value 80.494056 iter 70 value 80.354371 iter 80 value 80.325314 iter 90 value 80.259053 iter 100 value 80.244947 final value 80.244947 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 121.578663 iter 10 value 95.908712 iter 20 value 88.945219 iter 30 value 86.479290 iter 40 value 85.278611 iter 50 value 84.847735 iter 60 value 83.047178 iter 70 value 81.088469 iter 80 value 80.164779 iter 90 value 79.772880 iter 100 value 79.710578 final value 79.710578 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.664798 final value 94.485497 converged Fitting Repeat 2 # weights: 103 initial value 106.035696 final value 94.485767 converged Fitting Repeat 3 # weights: 103 initial value 98.028333 final value 94.485836 converged Fitting Repeat 4 # weights: 103 initial value 101.883042 final value 94.485819 converged Fitting Repeat 5 # weights: 103 initial value 97.944822 final value 94.485926 converged Fitting Repeat 1 # weights: 305 initial value 98.363532 iter 10 value 94.489187 iter 20 value 94.482197 iter 30 value 91.388323 iter 40 value 89.387572 final value 89.386025 converged Fitting Repeat 2 # weights: 305 initial value 109.430164 iter 10 value 94.487867 iter 20 value 94.483981 iter 30 value 94.478688 iter 40 value 94.477906 final value 94.477904 converged Fitting Repeat 3 # weights: 305 initial value 98.420182 iter 10 value 94.489082 iter 20 value 94.472608 iter 30 value 93.469540 iter 40 value 93.465931 iter 50 value 93.465539 iter 60 value 93.465438 iter 70 value 93.198079 iter 80 value 93.196677 iter 90 value 92.985139 iter 100 value 92.913261 final value 92.913261 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.808293 iter 10 value 94.296945 iter 20 value 92.807527 iter 30 value 84.957559 iter 40 value 84.109783 iter 50 value 83.326885 iter 60 value 82.739770 iter 70 value 81.956961 iter 80 value 81.882693 iter 90 value 81.881911 iter 100 value 81.881499 final value 81.881499 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 97.495971 iter 10 value 94.296833 iter 20 value 94.246515 iter 30 value 89.263767 iter 40 value 86.959282 iter 50 value 86.957807 iter 60 value 86.957503 iter 60 value 86.957502 iter 60 value 86.957502 final value 86.957502 converged Fitting Repeat 1 # weights: 507 initial value 97.917910 iter 10 value 94.492461 iter 20 value 94.484964 iter 30 value 86.882409 iter 40 value 85.324463 iter 40 value 85.324463 iter 40 value 85.324463 final value 85.324463 converged Fitting Repeat 2 # weights: 507 initial value 99.175250 iter 10 value 94.492673 iter 20 value 94.381921 iter 30 value 91.415096 iter 40 value 85.588656 iter 50 value 85.540066 iter 60 value 85.423258 iter 70 value 79.997207 iter 80 value 78.543966 iter 90 value 78.503275 iter 100 value 78.496682 final value 78.496682 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 118.451564 iter 10 value 91.748755 iter 20 value 87.329675 iter 30 value 85.896156 iter 40 value 84.809869 iter 50 value 84.796404 final value 84.792820 converged Fitting Repeat 4 # weights: 507 initial value 97.620759 iter 10 value 94.492176 iter 20 value 94.469456 iter 30 value 88.985124 iter 40 value 86.959216 iter 50 value 86.957838 iter 60 value 86.583662 final value 86.583307 converged Fitting Repeat 5 # weights: 507 initial value 112.383484 iter 10 value 94.492723 iter 20 value 94.478213 iter 30 value 88.926211 iter 40 value 88.925056 iter 50 value 88.656101 iter 60 value 87.370616 iter 70 value 86.457800 iter 80 value 84.523458 iter 90 value 82.216938 iter 100 value 82.102853 final value 82.102853 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.195932 final value 94.032967 converged Fitting Repeat 2 # weights: 103 initial value 101.341285 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 98.587412 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 94.580434 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.875098 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 98.410304 iter 10 value 94.045800 iter 20 value 93.988160 final value 93.988114 converged Fitting Repeat 2 # weights: 305 initial value 102.503023 final value 94.032967 converged Fitting Repeat 3 # weights: 305 initial value 95.647367 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 103.690003 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 96.901801 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 113.843274 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 110.547405 iter 10 value 93.869758 final value 93.869755 converged Fitting Repeat 3 # weights: 507 initial value 101.633236 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 97.492599 final value 94.032967 converged Fitting Repeat 5 # weights: 507 initial value 94.332091 final value 94.032967 converged Fitting Repeat 1 # weights: 103 initial value 97.053800 iter 10 value 94.075953 iter 20 value 93.607572 iter 30 value 89.430909 iter 40 value 84.219873 iter 50 value 83.848068 iter 60 value 83.767642 final value 83.763929 converged Fitting Repeat 2 # weights: 103 initial value 95.833345 iter 10 value 94.025814 iter 20 value 91.348100 iter 30 value 88.428370 iter 40 value 88.133967 iter 50 value 84.329558 iter 60 value 83.881542 iter 70 value 82.397472 iter 80 value 82.130104 iter 90 value 81.846929 iter 100 value 81.686294 final value 81.686294 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.334134 iter 10 value 94.080241 iter 20 value 93.921670 iter 30 value 93.877125 iter 40 value 93.873437 final value 93.873406 converged Fitting Repeat 4 # weights: 103 initial value 98.974145 iter 10 value 94.056677 iter 20 value 90.965117 iter 30 value 89.822983 iter 40 value 86.691970 iter 50 value 86.296888 iter 60 value 86.222141 iter 70 value 83.284341 iter 80 value 83.183627 iter 90 value 83.159407 final value 83.157414 converged Fitting Repeat 5 # weights: 103 initial value 105.139534 iter 10 value 94.055088 iter 20 value 94.007499 iter 30 value 84.904109 iter 40 value 83.887744 iter 50 value 83.830182 iter 60 value 83.797611 iter 70 value 83.674083 iter 80 value 83.578917 final value 83.577274 converged Fitting Repeat 1 # weights: 305 initial value 100.937742 iter 10 value 94.069416 iter 20 value 92.884902 iter 30 value 92.028316 iter 40 value 91.098698 iter 50 value 86.629465 iter 60 value 85.485983 iter 70 value 85.013538 iter 80 value 83.616972 iter 90 value 82.472374 iter 100 value 82.293881 final value 82.293881 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.606770 iter 10 value 94.049559 iter 20 value 93.387223 iter 30 value 93.124518 iter 40 value 88.543529 iter 50 value 85.178202 iter 60 value 84.179598 iter 70 value 83.353503 iter 80 value 82.217720 iter 90 value 81.360441 iter 100 value 80.961389 final value 80.961389 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.343878 iter 10 value 94.064404 iter 20 value 87.164593 iter 30 value 84.242485 iter 40 value 82.197187 iter 50 value 81.313090 iter 60 value 80.928284 iter 70 value 80.906371 iter 80 value 80.732231 iter 90 value 80.486365 iter 100 value 80.287345 final value 80.287345 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 113.822704 iter 10 value 94.966804 iter 20 value 94.378907 iter 30 value 93.217005 iter 40 value 86.338738 iter 50 value 85.839596 iter 60 value 85.567413 iter 70 value 84.089914 iter 80 value 81.399332 iter 90 value 80.819660 iter 100 value 80.757316 final value 80.757316 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 122.169191 iter 10 value 98.130567 iter 20 value 94.121420 iter 30 value 94.065835 iter 40 value 92.192896 iter 50 value 84.690976 iter 60 value 83.245068 iter 70 value 83.043597 iter 80 value 82.607295 iter 90 value 82.433027 iter 100 value 81.833724 final value 81.833724 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.049385 iter 10 value 93.960819 iter 20 value 90.394865 iter 30 value 84.405727 iter 40 value 83.880773 iter 50 value 83.723245 iter 60 value 83.589353 iter 70 value 83.456925 iter 80 value 83.357802 iter 90 value 83.288887 iter 100 value 82.525262 final value 82.525262 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 118.869948 iter 10 value 93.934728 iter 20 value 91.890519 iter 30 value 85.450587 iter 40 value 83.816018 iter 50 value 83.390143 iter 60 value 81.920010 iter 70 value 80.840156 iter 80 value 80.256426 iter 90 value 80.043886 iter 100 value 80.007211 final value 80.007211 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 107.753559 iter 10 value 93.843829 iter 20 value 89.038938 iter 30 value 83.910794 iter 40 value 83.133514 iter 50 value 82.558980 iter 60 value 82.263944 iter 70 value 82.222683 iter 80 value 82.033775 iter 90 value 81.532760 iter 100 value 80.698028 final value 80.698028 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 103.050566 iter 10 value 84.722837 iter 20 value 82.354992 iter 30 value 81.805409 iter 40 value 81.440792 iter 50 value 80.985433 iter 60 value 80.770033 iter 70 value 80.751213 iter 80 value 80.633823 iter 90 value 80.461304 iter 100 value 80.277915 final value 80.277915 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.036327 iter 10 value 91.115141 iter 20 value 86.739778 iter 30 value 84.594262 iter 40 value 84.127838 iter 50 value 83.630575 iter 60 value 82.208378 iter 70 value 80.979455 iter 80 value 80.480591 iter 90 value 80.190358 iter 100 value 80.099330 final value 80.099330 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.874238 final value 94.054366 converged Fitting Repeat 2 # weights: 103 initial value 100.991585 final value 93.493128 converged Fitting Repeat 3 # weights: 103 initial value 94.158441 final value 94.054679 converged Fitting Repeat 4 # weights: 103 initial value 101.323217 final value 94.054607 converged Fitting Repeat 5 # weights: 103 initial value 98.665273 iter 10 value 94.054415 iter 20 value 94.052925 final value 94.052915 converged Fitting Repeat 1 # weights: 305 initial value 103.656552 iter 10 value 94.037757 iter 20 value 94.033641 iter 30 value 93.873510 iter 40 value 85.935220 iter 50 value 84.901010 iter 60 value 84.893738 final value 84.893727 converged Fitting Repeat 2 # weights: 305 initial value 101.776749 iter 10 value 94.057953 iter 20 value 93.938800 final value 90.711408 converged Fitting Repeat 3 # weights: 305 initial value 101.166334 iter 10 value 93.993453 iter 20 value 93.971235 iter 30 value 93.832292 iter 40 value 93.823795 iter 50 value 93.757146 final value 93.755274 converged Fitting Repeat 4 # weights: 305 initial value 105.214249 iter 10 value 94.057576 iter 20 value 94.041682 iter 30 value 88.665820 iter 40 value 88.204330 iter 50 value 88.203415 iter 60 value 87.679607 iter 70 value 83.630511 iter 80 value 81.654616 iter 90 value 81.649080 iter 100 value 79.798946 final value 79.798946 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.372159 iter 10 value 94.016290 iter 20 value 94.011903 final value 94.011852 converged Fitting Repeat 1 # weights: 507 initial value 95.843366 iter 10 value 94.041587 iter 20 value 93.964469 iter 30 value 88.483797 iter 40 value 88.469642 iter 50 value 86.734201 iter 60 value 85.971861 iter 70 value 85.790011 iter 70 value 85.790010 iter 70 value 85.790010 final value 85.790010 converged Fitting Repeat 2 # weights: 507 initial value 121.369144 iter 10 value 92.197763 iter 20 value 86.942044 iter 30 value 86.939023 iter 40 value 86.936047 iter 50 value 86.933941 iter 60 value 86.927797 iter 70 value 86.815085 iter 80 value 86.034760 iter 90 value 85.771883 iter 100 value 85.770357 final value 85.770357 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 95.422340 iter 10 value 94.061278 iter 20 value 93.933869 iter 30 value 88.811535 iter 40 value 88.346053 iter 50 value 88.173529 iter 60 value 88.168845 final value 88.167350 converged Fitting Repeat 4 # weights: 507 initial value 129.120048 iter 10 value 94.041563 iter 20 value 94.034082 iter 30 value 93.666711 iter 40 value 88.274349 iter 50 value 86.031460 iter 60 value 83.006749 iter 70 value 81.898980 iter 80 value 81.727494 iter 90 value 81.718291 iter 100 value 81.674733 final value 81.674733 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 101.222402 iter 10 value 94.060246 iter 20 value 93.953290 iter 30 value 87.824067 final value 87.824054 converged Fitting Repeat 1 # weights: 103 initial value 99.113790 final value 94.032967 converged Fitting Repeat 2 # weights: 103 initial value 95.478634 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 96.511359 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.425924 final value 94.032967 converged Fitting Repeat 5 # weights: 103 initial value 96.039101 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 100.487150 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 113.709290 iter 10 value 93.900822 final value 93.900821 converged Fitting Repeat 3 # weights: 305 initial value 95.779333 iter 10 value 94.032971 final value 94.032967 converged Fitting Repeat 4 # weights: 305 initial value 98.686688 iter 10 value 90.356069 iter 20 value 90.080410 iter 30 value 90.080000 iter 30 value 90.080000 iter 30 value 90.080000 final value 90.080000 converged Fitting Repeat 5 # weights: 305 initial value 107.035056 iter 10 value 94.051987 final value 94.051984 converged Fitting Repeat 1 # weights: 507 initial value 102.513540 final value 94.032967 converged Fitting Repeat 2 # weights: 507 initial value 100.990940 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 99.741779 iter 10 value 86.759985 iter 20 value 85.625703 final value 85.617239 converged Fitting Repeat 4 # weights: 507 initial value 95.049500 iter 10 value 90.243419 final value 90.133835 converged Fitting Repeat 5 # weights: 507 initial value 106.997974 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 104.245442 iter 10 value 94.046480 iter 20 value 91.777800 iter 30 value 90.115964 iter 40 value 88.849346 iter 50 value 85.584157 iter 60 value 82.215006 iter 70 value 81.950054 iter 80 value 81.169945 iter 90 value 80.361565 iter 100 value 80.324197 final value 80.324197 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.246090 iter 10 value 93.906084 iter 20 value 88.401597 iter 30 value 86.092229 iter 40 value 85.805188 iter 50 value 85.071825 iter 60 value 84.784369 iter 70 value 84.719854 final value 84.718333 converged Fitting Repeat 3 # weights: 103 initial value 114.111471 iter 10 value 93.916281 iter 20 value 90.526762 iter 30 value 85.917872 iter 40 value 85.274205 iter 50 value 84.931775 iter 60 value 84.827449 iter 70 value 84.739385 iter 80 value 84.718426 final value 84.718333 converged Fitting Repeat 4 # weights: 103 initial value 108.460267 iter 10 value 93.973251 iter 20 value 91.689364 iter 30 value 91.157312 iter 40 value 90.126020 iter 50 value 84.591214 iter 60 value 83.469581 iter 70 value 83.167478 final value 83.136875 converged Fitting Repeat 5 # weights: 103 initial value 96.258918 iter 10 value 94.048569 iter 20 value 93.670136 iter 30 value 90.510217 iter 40 value 82.929896 iter 50 value 82.651311 iter 60 value 82.491868 iter 70 value 82.356621 iter 80 value 80.906539 iter 90 value 80.326346 final value 80.324196 converged Fitting Repeat 1 # weights: 305 initial value 111.674332 iter 10 value 94.320411 iter 20 value 93.942581 iter 30 value 87.192172 iter 40 value 83.319989 iter 50 value 82.424754 iter 60 value 82.038807 iter 70 value 81.569966 iter 80 value 81.119938 iter 90 value 79.829491 iter 100 value 79.451994 final value 79.451994 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.141274 iter 10 value 93.694479 iter 20 value 92.473478 iter 30 value 92.080720 iter 40 value 86.728234 iter 50 value 85.969551 iter 60 value 85.058245 iter 70 value 84.674844 iter 80 value 84.549820 iter 90 value 84.510957 iter 100 value 84.473081 final value 84.473081 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.938645 iter 10 value 94.069553 iter 20 value 93.457419 iter 30 value 87.842376 iter 40 value 84.005476 iter 50 value 82.417848 iter 60 value 81.292279 iter 70 value 80.937097 iter 80 value 80.663719 iter 90 value 79.973390 iter 100 value 79.726085 final value 79.726085 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.112333 iter 10 value 93.290751 iter 20 value 89.873198 iter 30 value 87.624833 iter 40 value 86.231430 iter 50 value 84.701595 iter 60 value 84.432476 iter 70 value 83.547195 iter 80 value 83.009276 iter 90 value 81.941281 iter 100 value 80.968779 final value 80.968779 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.551262 iter 10 value 93.822507 iter 20 value 87.992099 iter 30 value 83.297411 iter 40 value 82.508861 iter 50 value 81.922210 iter 60 value 81.445999 iter 70 value 81.263103 iter 80 value 81.123226 iter 90 value 80.898505 iter 100 value 80.650306 final value 80.650306 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.792685 iter 10 value 94.247108 iter 20 value 88.962428 iter 30 value 83.382248 iter 40 value 81.804147 iter 50 value 81.058281 iter 60 value 80.519691 iter 70 value 79.572807 iter 80 value 79.261187 iter 90 value 78.996665 iter 100 value 78.885616 final value 78.885616 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 117.664553 iter 10 value 94.462928 iter 20 value 86.193199 iter 30 value 85.877485 iter 40 value 84.399379 iter 50 value 83.580957 iter 60 value 82.277901 iter 70 value 81.618010 iter 80 value 81.466613 iter 90 value 81.321103 iter 100 value 81.200457 final value 81.200457 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 127.785083 iter 10 value 93.982642 iter 20 value 93.152461 iter 30 value 87.063407 iter 40 value 85.536527 iter 50 value 82.696688 iter 60 value 81.945342 iter 70 value 80.288810 iter 80 value 79.551858 iter 90 value 79.440902 iter 100 value 79.381652 final value 79.381652 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.022978 iter 10 value 94.073121 iter 20 value 90.826230 iter 30 value 84.416118 iter 40 value 82.097162 iter 50 value 81.244121 iter 60 value 81.125838 iter 70 value 80.987151 iter 80 value 80.780545 iter 90 value 80.478053 iter 100 value 80.130214 final value 80.130214 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.096351 iter 10 value 93.040027 iter 20 value 84.841150 iter 30 value 82.896564 iter 40 value 80.512620 iter 50 value 79.650101 iter 60 value 79.243469 iter 70 value 79.142370 iter 80 value 79.112283 iter 90 value 79.058193 iter 100 value 78.958805 final value 78.958805 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.090238 final value 94.054747 converged Fitting Repeat 2 # weights: 103 initial value 100.667101 final value 94.054317 converged Fitting Repeat 3 # weights: 103 initial value 96.810185 final value 94.054478 converged Fitting Repeat 4 # weights: 103 initial value 97.327483 iter 10 value 94.054696 iter 20 value 93.694632 final value 93.604740 converged Fitting Repeat 5 # weights: 103 initial value 95.909730 final value 94.054570 converged Fitting Repeat 1 # weights: 305 initial value 96.774711 iter 10 value 94.056614 iter 20 value 93.995513 iter 30 value 93.682486 iter 40 value 93.657466 final value 93.633742 converged Fitting Repeat 2 # weights: 305 initial value 109.106544 iter 10 value 94.038262 iter 20 value 93.413402 iter 30 value 85.950814 iter 40 value 85.131982 iter 50 value 85.106065 iter 60 value 85.105783 iter 70 value 84.919403 iter 80 value 84.914535 final value 84.914463 converged Fitting Repeat 3 # weights: 305 initial value 94.284559 iter 10 value 94.054315 iter 20 value 93.604770 final value 93.604689 converged Fitting Repeat 4 # weights: 305 initial value 95.615357 iter 10 value 94.057508 iter 20 value 94.052781 iter 30 value 93.536368 iter 40 value 83.743790 iter 50 value 81.686103 iter 60 value 80.479059 iter 70 value 78.646754 iter 80 value 78.537284 iter 90 value 78.484441 iter 100 value 78.484138 final value 78.484138 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 121.040762 iter 10 value 94.058023 iter 20 value 94.051561 iter 30 value 92.081741 iter 40 value 84.656892 iter 50 value 83.811375 iter 60 value 83.810710 iter 70 value 83.719070 final value 83.717140 converged Fitting Repeat 1 # weights: 507 initial value 94.958922 iter 10 value 94.046982 iter 20 value 93.658944 iter 30 value 85.540736 iter 40 value 85.116720 iter 50 value 84.169717 iter 60 value 84.017140 iter 70 value 83.399190 iter 80 value 83.362278 iter 90 value 83.320617 iter 100 value 83.314456 final value 83.314456 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 112.273734 iter 10 value 94.061095 iter 20 value 94.053316 iter 30 value 93.613944 final value 93.605135 converged Fitting Repeat 3 # weights: 507 initial value 103.275129 iter 10 value 94.041762 iter 20 value 94.034587 final value 94.033589 converged Fitting Repeat 4 # weights: 507 initial value 96.041983 iter 10 value 94.033562 iter 20 value 93.969326 iter 30 value 93.549908 iter 40 value 93.286262 iter 50 value 90.072200 iter 60 value 88.813224 iter 70 value 88.812723 iter 80 value 88.812335 iter 90 value 88.780960 iter 100 value 88.731463 final value 88.731463 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 96.994367 iter 10 value 94.060760 iter 20 value 94.040241 iter 30 value 90.462831 iter 40 value 85.329171 iter 50 value 80.902844 iter 60 value 79.682909 iter 70 value 79.620433 final value 79.608937 converged Fitting Repeat 1 # weights: 103 initial value 102.231073 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.637795 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 95.247617 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 102.006167 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.654891 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 115.947294 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 100.866982 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 106.047089 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 104.104300 iter 10 value 93.394928 iter 10 value 93.394928 iter 10 value 93.394928 final value 93.394928 converged Fitting Repeat 5 # weights: 305 initial value 100.776033 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 100.783347 iter 10 value 93.813954 iter 10 value 93.813953 iter 10 value 93.813953 final value 93.813953 converged Fitting Repeat 2 # weights: 507 initial value 102.763306 iter 10 value 93.352332 iter 20 value 93.135351 final value 93.135239 converged Fitting Repeat 3 # weights: 507 initial value 110.318658 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 98.318309 iter 10 value 93.394945 final value 93.394928 converged Fitting Repeat 5 # weights: 507 initial value 122.192630 iter 10 value 93.637371 iter 10 value 93.637370 final value 93.637370 converged Fitting Repeat 1 # weights: 103 initial value 103.687066 iter 10 value 94.488631 iter 20 value 94.468734 iter 30 value 93.790676 iter 40 value 93.702571 iter 50 value 93.547487 iter 60 value 93.002727 iter 70 value 87.861384 iter 80 value 87.363855 iter 90 value 85.241733 iter 100 value 85.202425 final value 85.202425 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 104.329122 iter 10 value 94.826942 iter 20 value 94.489163 iter 30 value 88.724920 iter 40 value 87.751420 iter 50 value 86.363896 iter 60 value 85.693904 iter 70 value 84.052890 iter 80 value 83.645084 iter 90 value 83.239129 iter 100 value 83.200323 final value 83.200323 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 103.554761 iter 10 value 94.488540 iter 20 value 93.680334 iter 30 value 92.225489 iter 40 value 86.688847 iter 50 value 85.220367 iter 60 value 84.583540 iter 70 value 84.401395 iter 80 value 84.369105 iter 90 value 82.966116 final value 82.966113 converged Fitting Repeat 4 # weights: 103 initial value 107.304304 iter 10 value 94.387357 iter 20 value 93.632291 iter 30 value 93.527758 iter 40 value 89.010555 iter 50 value 85.177928 iter 60 value 84.924735 iter 70 value 84.828971 iter 80 value 84.253699 iter 90 value 83.700271 iter 100 value 83.202837 final value 83.202837 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 106.775749 iter 10 value 94.511968 iter 20 value 94.464232 iter 30 value 90.612660 iter 40 value 87.571404 iter 50 value 87.481244 iter 60 value 86.011425 iter 70 value 85.678431 iter 80 value 85.323357 iter 90 value 84.575472 iter 100 value 83.931146 final value 83.931146 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.400503 iter 10 value 94.453095 iter 20 value 93.731305 iter 30 value 93.545263 iter 40 value 93.421281 iter 50 value 91.685761 iter 60 value 86.354835 iter 70 value 85.110717 iter 80 value 82.760762 iter 90 value 82.380195 iter 100 value 82.058973 final value 82.058973 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 107.187399 iter 10 value 94.585297 iter 20 value 94.454445 iter 30 value 86.633202 iter 40 value 86.307310 iter 50 value 85.847645 iter 60 value 85.185172 iter 70 value 82.987230 iter 80 value 82.540607 iter 90 value 82.159088 iter 100 value 82.025108 final value 82.025108 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 102.099989 iter 10 value 94.493871 iter 20 value 93.560422 iter 30 value 87.099472 iter 40 value 86.276371 iter 50 value 85.689822 iter 60 value 82.967502 iter 70 value 82.243329 iter 80 value 82.077567 iter 90 value 81.890122 iter 100 value 81.830909 final value 81.830909 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.876811 iter 10 value 93.944179 iter 20 value 93.542847 iter 30 value 93.453055 iter 40 value 92.371988 iter 50 value 90.323116 iter 60 value 89.181659 iter 70 value 87.367917 iter 80 value 85.292969 iter 90 value 84.934807 iter 100 value 84.769695 final value 84.769695 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.691779 iter 10 value 94.499711 iter 20 value 90.490871 iter 30 value 88.752766 iter 40 value 87.374273 iter 50 value 85.376034 iter 60 value 84.273056 iter 70 value 83.859814 iter 80 value 83.593839 iter 90 value 83.428849 iter 100 value 83.068039 final value 83.068039 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.143066 iter 10 value 94.297475 iter 20 value 86.746536 iter 30 value 85.338846 iter 40 value 84.692355 iter 50 value 83.649458 iter 60 value 82.733221 iter 70 value 82.424325 iter 80 value 82.143442 iter 90 value 82.059469 iter 100 value 82.040434 final value 82.040434 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.460781 iter 10 value 87.256808 iter 20 value 85.751529 iter 30 value 85.435369 iter 40 value 84.699639 iter 50 value 83.763596 iter 60 value 82.836814 iter 70 value 82.417404 iter 80 value 82.161829 iter 90 value 82.065018 iter 100 value 82.018302 final value 82.018302 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 124.964178 iter 10 value 94.637473 iter 20 value 90.953043 iter 30 value 87.732682 iter 40 value 85.152062 iter 50 value 83.737056 iter 60 value 83.248727 iter 70 value 82.370239 iter 80 value 81.904388 iter 90 value 81.710600 iter 100 value 81.655358 final value 81.655358 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.197733 iter 10 value 98.130232 iter 20 value 93.061095 iter 30 value 90.734764 iter 40 value 87.465769 iter 50 value 85.755443 iter 60 value 83.169107 iter 70 value 82.568536 iter 80 value 82.006988 iter 90 value 81.846457 iter 100 value 81.566858 final value 81.566858 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.960584 iter 10 value 94.832212 iter 20 value 88.686725 iter 30 value 87.171352 iter 40 value 86.601242 iter 50 value 86.300921 iter 60 value 84.070205 iter 70 value 83.673257 iter 80 value 83.024919 iter 90 value 82.558491 iter 100 value 82.174146 final value 82.174146 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.056785 iter 10 value 93.650267 iter 20 value 93.316526 iter 30 value 93.299241 iter 40 value 93.254429 final value 93.254364 converged Fitting Repeat 2 # weights: 103 initial value 96.452307 final value 94.486009 converged Fitting Repeat 3 # weights: 103 initial value 101.972914 final value 94.485874 converged Fitting Repeat 4 # weights: 103 initial value 104.898741 final value 94.485802 converged Fitting Repeat 5 # weights: 103 initial value 99.240578 iter 10 value 93.458034 iter 20 value 88.881343 iter 30 value 88.783834 iter 40 value 88.782079 iter 50 value 88.735254 iter 60 value 88.734106 iter 70 value 88.710191 iter 80 value 87.169360 iter 90 value 86.623132 final value 86.579184 converged Fitting Repeat 1 # weights: 305 initial value 111.439208 iter 10 value 94.489283 iter 20 value 93.995631 iter 30 value 89.568208 iter 40 value 88.096371 iter 50 value 86.877341 iter 60 value 86.274927 iter 70 value 86.274735 final value 86.273643 converged Fitting Repeat 2 # weights: 305 initial value 97.743526 iter 10 value 93.642485 iter 20 value 93.455949 iter 30 value 86.178266 iter 40 value 86.117035 iter 50 value 86.116805 iter 60 value 86.116108 iter 70 value 85.926501 iter 80 value 83.986619 iter 90 value 83.018786 iter 100 value 82.853905 final value 82.853905 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 96.290229 iter 10 value 94.488765 iter 20 value 94.484219 iter 30 value 93.408161 final value 93.395424 converged Fitting Repeat 4 # weights: 305 initial value 98.035936 iter 10 value 94.489268 iter 20 value 94.329477 iter 30 value 86.631262 iter 40 value 86.630667 iter 50 value 86.280594 iter 60 value 86.244556 iter 70 value 85.695108 iter 80 value 85.485502 iter 90 value 85.367267 iter 100 value 85.007776 final value 85.007776 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 125.987409 iter 10 value 93.422343 iter 20 value 93.400633 iter 30 value 93.395818 iter 40 value 87.419277 iter 50 value 86.870043 iter 60 value 86.625188 iter 60 value 86.625188 iter 60 value 86.625188 final value 86.625188 converged Fitting Repeat 1 # weights: 507 initial value 107.626363 iter 10 value 93.404211 iter 20 value 92.890390 iter 30 value 88.991049 iter 40 value 88.838353 iter 50 value 88.835482 iter 60 value 88.267859 iter 70 value 85.544609 iter 80 value 82.691527 iter 90 value 81.248000 iter 100 value 80.983342 final value 80.983342 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.679282 iter 10 value 93.646970 iter 20 value 93.524139 iter 30 value 93.519686 iter 40 value 93.299573 iter 50 value 88.972990 iter 60 value 88.711744 iter 70 value 88.700762 iter 80 value 88.274788 iter 90 value 88.245632 iter 100 value 88.116971 final value 88.116971 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.910731 iter 10 value 89.704839 iter 20 value 85.763529 iter 30 value 85.761748 iter 40 value 85.758924 iter 50 value 85.756836 iter 60 value 85.756739 iter 70 value 85.756063 iter 80 value 84.120097 iter 90 value 84.091901 iter 100 value 83.811814 final value 83.811814 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.148891 iter 10 value 94.492037 iter 20 value 93.500556 final value 92.897997 converged Fitting Repeat 5 # weights: 507 initial value 98.586673 iter 10 value 93.363330 iter 20 value 93.349345 iter 30 value 93.342999 final value 93.341756 converged Fitting Repeat 1 # weights: 507 initial value 132.747684 iter 10 value 118.103117 iter 20 value 114.164317 iter 30 value 109.732972 iter 40 value 105.753000 iter 50 value 104.059008 iter 60 value 101.661853 iter 70 value 101.467175 iter 80 value 100.985531 iter 90 value 100.925084 iter 100 value 100.733897 final value 100.733897 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 128.191992 iter 10 value 115.639133 iter 20 value 106.766839 iter 30 value 105.145627 iter 40 value 103.307790 iter 50 value 103.227054 iter 60 value 102.772157 iter 70 value 102.403021 iter 80 value 102.089986 iter 90 value 101.564958 iter 100 value 101.391784 final value 101.391784 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 138.202327 iter 10 value 115.845192 iter 20 value 106.359185 iter 30 value 103.273327 iter 40 value 102.146009 iter 50 value 101.159016 iter 60 value 101.120958 iter 70 value 100.993608 iter 80 value 100.734035 iter 90 value 100.613112 iter 100 value 100.500974 final value 100.500974 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 141.488406 iter 10 value 118.774444 iter 20 value 110.170290 iter 30 value 107.626752 iter 40 value 107.192039 iter 50 value 105.334023 iter 60 value 103.977939 iter 70 value 102.375482 iter 80 value 101.683082 iter 90 value 101.474061 iter 100 value 101.364945 final value 101.364945 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 146.920872 iter 10 value 118.911128 iter 20 value 117.894606 iter 30 value 107.783114 iter 40 value 106.172825 iter 50 value 105.507225 iter 60 value 104.842846 iter 70 value 103.059057 iter 80 value 102.446979 iter 90 value 102.228598 iter 100 value 101.251747 final value 101.251747 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Thu Oct 10 06:51:01 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 72.226 2.266 92.558
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 51.721 | 1.851 | 61.821 | |
FreqInteractors | 0.515 | 0.030 | 0.665 | |
calculateAAC | 0.077 | 0.016 | 0.114 | |
calculateAutocor | 0.882 | 0.114 | 1.157 | |
calculateCTDC | 0.154 | 0.009 | 0.197 | |
calculateCTDD | 1.302 | 0.037 | 1.582 | |
calculateCTDT | 0.443 | 0.015 | 0.537 | |
calculateCTriad | 0.775 | 0.040 | 0.955 | |
calculateDC | 0.260 | 0.031 | 0.347 | |
calculateF | 0.733 | 0.022 | 0.890 | |
calculateKSAAP | 0.297 | 0.025 | 0.369 | |
calculateQD_Sm | 3.680 | 0.222 | 4.636 | |
calculateTC | 4.803 | 0.525 | 6.161 | |
calculateTC_Sm | 0.542 | 0.030 | 0.644 | |
corr_plot | 51.584 | 1.853 | 62.289 | |
enrichfindP | 0.902 | 0.080 | 14.077 | |
enrichfind_hp | 0.131 | 0.030 | 1.208 | |
enrichplot | 0.836 | 0.013 | 0.981 | |
filter_missing_values | 0.002 | 0.000 | 0.003 | |
getFASTA | 0.119 | 0.017 | 2.681 | |
getHPI | 0.001 | 0.001 | 0.002 | |
get_negativePPI | 0.003 | 0.001 | 0.004 | |
get_positivePPI | 0.000 | 0.001 | 0.001 | |
impute_missing_data | 0.002 | 0.002 | 0.005 | |
plotPPI | 0.148 | 0.008 | 0.158 | |
pred_ensembel | 24.530 | 0.511 | 24.637 | |
var_imp | 50.913 | 1.775 | 62.232 | |