Package: GGdata

Version: 0.0-7

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD check GGdata_0.0-7.tar.gz

RetCode: 0

Time: 341.6 seconds

Status: WARNINGS

CheckDir: GGdata.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-2.0-data-experiment/meat/GGdata.Rcheck'
* using R version 2.5.1 (2007-06-27)
* checking for file 'GGdata/DESCRIPTION' ... OK
* this is package 'GGdata' version '0.0-7'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GGdata' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented data sets:
  geneLocs hgfocusSYMMEMO
All user-level objects in a package should have documentation entries.
See the chapter 'Writing R documentation files' in manual 'Writing R
Extensions'.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... NOTE
  Error: cannot allocate vector of size 46.0 Mb
  Call sequence:
  3: load(zfile, envir = envir)
  2: switch(ext, R = , r = {
         library("utils")
         sys.source(zfile, chdir = TRUE, envir = envir)
     }, RData = , rdata = , rda = load(zfile, envir = envir), TXT = , 
         txt = , tab = assign(name, read.table(zfile, header = TRUE, 
             as.is = FALSE), envir = envir), CSV = , csv = assign(name, 
             read.table(zfile, header = TRUE, sep = ";", as.is = FALSE), 
             envir = envir), found <- FALSE)
  1: utils::data(list = f, package = character(0), envir = dataEnv)
  Execution halted
Portable packages use only ASCII characters in their datasets.
* creating GGdata-Ex.R ... OK
* checking examples ... OK
* creating GGdata-manual.tex ... OK
* checking GGdata-manual.tex ... OK

WARNING: There was 1 warning, see
  D:/biocbld/bbs-2.0-data-experiment/meat/GGdata.Rcheck/00check.log
for details

installing R.css in D:/biocbld/bbs-2.0-data-experiment/meat/GGdata.Rcheck


---------- Making package GGdata ------------
  adding build stamp to DESCRIPTION
  no R files in this package
  installing data files
  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'GGdata'
     Formats: text html latex example chm 
  c20GGceu                          text    html    latex   example chm
  chr20meta                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-2.0-data-experiment\meat\GGdata.Rcheck\00_pkg_src\GGdata\chm\GGdata.chm


Compile time: 0 minutes, 0 seconds
3	Topics
54	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-2.0-data-experiment\meat\GGdata.Rcheck\00_pkg_src\GGdata\chm\GGdata.chm, 18,351 bytes
Compression decreased file by 5,909 bytes.
  adding MD5 sums

* DONE (GGdata)